Telopea speciosissima (New South Wales waratah): 122664459
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Entry
122664459 CDS
T07910
Name
(RefSeq) nuclear pore complex protein NUP62 isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122664459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122664459
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122664459
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Prefoldin_2
AAA_23
ACBP4_C
Motif
Other DBs
NCBI-GeneID:
122664459
NCBI-ProteinID:
XP_043716216
LinkDB
All DBs
Position
6:57354922..57372009
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AA seq
715 aa
AA seq
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MSGFTFPAFGSSTSSSSSSSPFSTSSTPSFSPFPSTNYSSSSQQAPSRYTFGSTSSSSSS
LFGSSAPSTGGFSIGTSLFGSSSSASTTATASPSTTSNLFGGSQPSSAPKYSFPFGSTSS
SSGSSTLNPNFGLSSGSASSGSSAPSSLFGLPSNSASGAITGSSLFGVSSSPFGASSTSG
STATAAPASSASGAISGTPLFGATSPFGVSSTSNSAATAPAFSASTMFGTSSAAAASTAL
SASPLFGVSSTSASVTNSTSAFSSSLLGSPLPASLTAATSSPSFPGLFSSTSSSASPFSA
SSTPAATPSSSPILSFGTHAPSSTQSSFGFGNAASNVASNSTVSSIQVTKPPSFSFGTSS
TVSTAGVSVTTETSTPAPSILFSSQAAASSTSTPSVPVFGASSSVATISSASVVTSTTAS
SATTTPFPSFSLSAKTSAPSSASQPQSTTTAALAFGVSASTSAGASTDVAAKFSFAGSSS
SAAKTPSVAVASSSGTASSTVSTTISATPKLPSEITGKTVEEIIKEWNSELQERTGKFRK
QACAIAEWDKRILQNRDILLRLEIEVAKVVETQANLERQLELIETYQQEVDKALQSIEEE
AERVYKDERALLLEDEAASTRDAMYEQAEFIEREMEQMTEQIKSIIQTLNASQGGGLDAI
DGMNPLDVVVRILNNQLSSLMWIDEKAEEFSSQIQKLAHRGSADRDLMGSKFWMT
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggctttaccttcccagcgttcggttcttctacttcctcctcttcatcatcttcc
cccttctctacttcatcaactccttctttctctcctttccctagcaccaactattcctct
tcatcgcagcaagctccatcacggtatactttcggatcaacctcttcatcttcttcatct
ctttttggttcttctgctccgtctactggtggcttctcaatcgggacatcactctttggt
tcttcgtcctctgcaagtactacagctacagcttctccgtctactacatctaaccttttt
ggtggatctcagccctcttctgccccaaaatattcttttccatttggctctacttcatcg
tcatcgggatcatcaactttgaaccctaactttggattatcttctggttctgcttcttcg
ggttcctctgctccttcttccctatttggactgccttcgaattctgcatctggagcgatt
accggttcgtctctgtttggggtgtcttcgtcgccgttcggagcttcttcaacttcaggt
tctacagcaactgctgccccggctagttctgcatctggagcgatttccggtacccctctg
tttggggcgacttcgccgtttggagtttcttcaacttcaaattctgcagcaactgccccg
gctttctccgcttctacgatgtttggaacttcctcagctgctgcagcttctactgcgctt
tccgcttctccgttgtttggggtttcttcaacttcagcttcggtaactaattctacttcg
gcattttcttcctctttgttaggaagtcctttaccagcttctttgactgcggctaccagc
tccccttcttttcctggcctgttttcttccacttccagttcggcttcaccgttttcggcc
tcttctacgcctgctgcaacgccatcttcctcaccaattctctctttcggaactcatgca
ccgtcttccacccagtcttcgtttggatttggcaatgcagcatctaatgttgcgtctaat
tctacagtctctagcatacaagtcacgaagcctccttcctttagctttgggacttcctca
acagtcagtaccgcgggcgtttcagttacaacagagacttcaacccctgcgccttcaatc
ttgttctcgtcacaagcagctgcctcgtctacttctacaccatcagttcctgtttttggg
gcaagttcttcagtggcaactatatcttcagcatcagtagttactagcacaactgcttcc
tctgctactactactcctttcccaagtttttcattgtcagccaaaacctcagctccatct
tcagcttcacagcctcaatcaacaaccactgcagcattggcatttggtgtttctgcttca
acttctgcaggtgcatcaactgatgtggcagcaaaattcagttttgctggttccagtagc
agtgcagctaagacaccttctgttgctgtagccagcagtagcgggactgcatcttcaact
gttagtacaacgatatctgccacgcctaaactaccatctgagataactgggaaaactgtt
gaggagattataaaagaatggaactcagagctacaagaacgtaccgggaaatttcgaaag
caagcttgtgcaatagctgagtgggacaagaggatcctgcaaaatcgagacattcttcta
aggcttgagattgaagtagcaaaagtggttgagacgcaggctaatttggagcggcaattg
gagttgattgaaacttatcaacaagaagttgacaaagctttgcaaagtatagaagaagaa
gctgagcgtgtttacaaggatgagcgggcattgctcttggaagatgaggcagcatctaca
cgggatgcaatgtatgagcaggcagagtttattgagagggagatggaacagatgacggaa
caaataaaatcaattattcagaccttaaatgccagccagggtgggggccttgatgctatc
gatgggatgaacccattagatgtcgttgttcggattctaaacaatcagctcagttcactc
atgtggattgatgagaaggctgaagaattctcgtcccagattcagaagcttgctcaccgt
ggttctgctgatcgggatttgatgggctcaaaattctggatgacctga
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