Telopea speciosissima (New South Wales waratah): 122664579
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Entry
122664579 CDS
T07910
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03030
DNA replication
tss03410
Base excision repair
tss03420
Nucleotide excision repair
tss03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122664579
03410 Base excision repair
122664579
03420 Nucleotide excision repair
122664579
03430 Mismatch repair
122664579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tss03032
]
122664579
03036 Chromosome and associated proteins [BR:
tss03036
]
122664579
03400 DNA repair and recombination proteins [BR:
tss03400
]
122664579
DNA replication proteins [BR:
tss03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122664579
DNA Replication Termination Factors
ELG1-RFC complex
122664579
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122664579
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122664579
Check point factors
HRAD17(Rad24)-RFC complex
122664579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
RuvB_N
Mg_chelatase
AAA_16
Rad17
Viral_helicase1
RCF1-5-like_lid
AAA_5
AAA_11
AAA_24
nSTAND3
AAA_19
AAA_assoc_2
AAA_25
AAA_3
DNAX_ATPase_lid
AAA_18
MeaB
AAA_30
AAA_28
ABC_tran
bpMoxR
AAA_7
NTPase_1
RNA_helicase
FtsK_SpoIIIE
DO-GTPase1
NPHP3_N
MipZ
SRP54
KTI12
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
122664579
NCBI-ProteinID:
XP_043716391
LinkDB
All DBs
Position
6:59744950..59751337
Genome browser
AA seq
334 aa
AA seq
DB search
MAASSSSTSSSNSYDVPWVEKYRPTKVADVVGNEDAVSRLQVIARDGNMPHLILAGPPGT
GKTTSILALAHELLGANCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIIL
DEADSMTSGAQQALRRTMEIYSNSTRFALACNMSSKIIEPIQSRCALVRFSRLSDQEILA
RLMIVVEAEQVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHP
LHVKNMVHNVLEGKFDDACSGLKHLYDLGYSPTDIITTIFRIIKNYDMAEYLKLEFLKET
GFAHMRICDGVGSLLQLSGLLAKLALVRETAKAM
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttcatcttcttcgacatcaagcagcaatagttacgatgtcccatgggtggag
aagtacagaccgaccaaagtagccgacgttgttgggaacgaagatgccgtctcaaggctt
caagtcatcgccagagatggcaacatgccccatctcatcttggccgggcctccaggaact
ggtaagacgacaagtattctggcccttgcgcatgagctattgggagcaaattgcaaggaa
gctgtgctagagcttaatgcatctgatgacaggggaatcgatgtcgtgagaaacaagatt
aaaatgtttgcccagaagaaagtaacgctgcccccaggacggcacaaaataataattttg
gacgaggcagacagtatgacatctggagcacaacaagctttgaggcgtacaatggaaatt
tattcaaactccacacgttttgctcttgcatgtaatatgtcttctaagataattgagccc
atccagagtagatgtgcacttgttcgtttttctagattatcagaccaagagattcttgcc
cgtcttatgatagtggtcgaagctgagcaggttccgtatgtgcccgaaggccttgaagca
attattttcactgctgatggtgatatgaggcaggctttgaataacttgcaggccacatac
agtggttttcgttttgtcaatcaagaaaatgtgttcaaggtctgtgaccagcctcacccc
ttacacgtgaagaatatggtacataatgtacttgaggggaaatttgatgatgcctgttct
gggctgaagcatctctatgatttgggctattccccaactgatataatcacaaccattttc
cggataattaagaactatgatatggccgagtatctaaaattagaattcctgaaggaaact
ggatttgcacacatgaggatctgtgatggagttggctcacttcttcagctatctggtctc
ctagccaagcttgctctagttcgggaaactgctaaagccatgtag
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integrated database retrieval system
