Telopea speciosissima (New South Wales waratah): 122664922
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Entry
122664922 CDS
T07910
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122664922
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tss04812
]
122664922
Enzymes [BR:
tss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
122664922
Membrane trafficking [BR:
tss04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
122664922
Cytoskeleton proteins [BR:
tss04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
122664922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_22
Vps4_C
AAA_14
AAA_16
AAA_2
Mg_chelatase
NPHP3_N
TIP49
DUF815
MIT
nSTAND3
IstB_IS21
AAA_25
RNA_helicase
nSTAND_NTPase5
Guanylate_kin
AAA_24
Motif
Other DBs
NCBI-GeneID:
122664922
NCBI-ProteinID:
XP_043716893
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All DBs
Position
6:61561872..61579450
Genome browser
AA seq
486 aa
AA seq
DB search
MSFLKGLVDSLGGIFSGLSPADEPTYPAKDRNRTMEGGSEPSVSNERIAYKLKGYFDLAK
EEIAKAVRAEEWGLVDDAILHYKNAQRILLEASSTRAPSYISSSEQEKVKSYHQKISKWQ
GQVSDRLQVLDRRAVSMATNKATSLPTGSSTASSTRKDVLKKPSFSSRNNSVMKNQTNNV
GSSKPIQELGGAYDAKLVQMINTAIVDRSPSVKWEDIAGLEKAKQTLMEMVILPTKRRDL
FTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFSVSASSLTSKWVGEAEKLVSTLF
MVATSRQPSVIFIDEIDSIMSTRLANEGDWSRRLKSEFLVQFDGVTSNPDDLVIVIGATN
KPQELDDAVLRRLVKRIYIPLPDENVRRLLLKNILKGRDFSLPGGDLERLVKETEGYSGS
DLRALCEEAAMMPIRELGPSILTVKANQVRPLRYSDFQKAMTVIRPSLQKSKWEDLQQWN
REFGSN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagttttttgaaaggactcgttgattctcttgggggtatcttctctggtctgagccct
gctgatgaaccaacataccctgccaaggatcgcaataggaccatggaaggcggttctgag
ccttccgtttcaaacgaaaggatagcttataaactgaaaggttacttcgatttggccaag
gaggagatcgccaaggccgttcgggccgaagagtggggtttggtagacgatgccattctt
cactacaagaatgcccaacgaattttactagaagccagttccaccagggcaccttcctat
atatcttccagtgaacaagagaaggtgaagtcttaccatcaaaagatatcgaaatggcag
gggcaagtttctgacagactacaagttttagatcggcgggcggttagcatggcaacgaac
aaggctacttcgctgccaactggttcatcaactgcatccagtactaggaaagatgtatta
aaaaaaccttccttctccagtagaaacaattcagtaatgaagaaccagacaaataatgtt
ggaagctcaaaacccattcaagaacttggcggtgcctatgatgcaaaactggttcaaatg
ataaatactgcgatagtggatagaagtccttctgttaaatgggaagacatcgctggtctt
gagaaggcaaagcaaactttgatggaaatggttatcttaccaactaagagaagagacctg
ttcactggtctacgcaagccagctagagggcttcttctctttggtccacctggtaacggg
aagaccatgcttgctaaagctgttgcttcagagtcagaggcaacattttttagtgtttct
gcctcctctcttacatcaaagtgggtgggagaggcagaaaagcttgtcagcactcttttt
atggttgctacttcaaggcagccatccgtaatttttattgatgaaattgatagtatcatg
tcgacaaggttggctaatgagggtgactggagcagacggttgaagtcagaattcttagtc
cagtttgatggggttacctctaatcctgatgatttagtaattgtcattggtgcaactaat
aagccacaagaattggatgatgcagttctacggagattggtaaagagaatatatatacct
ctaccagatgaaaatgttaggagacttcttctcaaaaatatactcaaaggtcgagatttt
tctttaccaggcggagatttggaaaggcttgtaaaggagacagaaggatattctggaagt
gatctacgagcattgtgtgaagaagctgcaatgatgcctattagagaacttggtccaagc
attctcactgtcaaggcaaatcaggtgcgtccgttgaggtacagtgattttcagaaagca
atgacagtcattagacccagcctacagaaaagcaagtgggaagatctccaacaatggaat
cgagagtttggttctaattaa
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