Telopea speciosissima (New South Wales waratah): 122665304
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Entry
122665304 CDS
T07910
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122665304
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tss01009
]
122665304
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tss03041
]
122665304
Protein phosphatases and associated proteins [BR:
tss01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122665304
Spliceosome [BR:
tss03041
]
Common components
Common spliceosomal components
SR proteins
122665304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
122665304
NCBI-ProteinID:
XP_043717354
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All DBs
Position
6:64111859..64117292
Genome browser
AA seq
206 aa
AA seq
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MSYSREGRSPSPSRSRSPPKGRRARSLSRSRERSRSRSRDSEGAGNPGNNLYVTGLSTRV
TTSDLEKYFNREGKVLECHLVSDPRTRESRGFAFVTMETVEDADRCIKYLNRSVLEGRLI
TVQKAKRKRGRTPTPGRYHGLKDRRGHGRRRSRSYSPRRRQERDHWRDRRERSRSPYGRR
VDEYDSHKRRRDHSLSGGSEGNPRAG
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgtcatattcgagagaaggaaggtccccgtctccctcccgctccagatctccccctaag
ggtcgcagggcaagatcactgtcaaggtcgagggaaaggagtcgctcaaggagccgagat
tctgaaggtgcaggcaatcctggaaacaacttgtacgtaacgggcttatcaacaagggtc
actaccagtgatcttgagaaatattttaaccgtgaaggaaaggttctggaatgccatctg
gtttctgatcctcgtacaagggaatctcggggatttgcgtttgttacaatggaaaccgtt
gaagatgcagaccgctgtatcaaatatctaaaccggtctgtgcttgaaggtcgactaatc
actgtccaaaaggcaaaaaggaagcgtgggaggacaccgacaccgggccgataccatggt
ttgaaggacagaagaggacatggtcgcagacggtctcgtagctattctccacgtagacgc
caagaaagagatcattggagggatcgtagagaaagatctcgctctccatatgggaggagg
gttgacgagtatgactcacacaagaggcgtagggaccattccttgtcaggtggtagtgag
ggcaatcctagagcaggttaa
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