Telopea speciosissima (New South Wales waratah): 122665691
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Entry
122665691 CDS
T07910
Name
(RefSeq) transcription initiation factor IIE subunit alpha-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122665691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122665691
Transcription machinery [BR:
tss03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
122665691
Prokaryotic type
Archaeal type
TFE
122665691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Cas12f1-like_TNB
ADK_lid
Zn_ribbon_8
wHTH-PRTase_assc
HVO_0758
CpXC
Motif
Other DBs
NCBI-GeneID:
122665691
NCBI-ProteinID:
XP_043717777
LinkDB
All DBs
Position
6:complement(36472781..36532939)
Genome browser
AA seq
486 aa
AA seq
DB search
MSVEPFNRLVKLAARAFYDDIAMKGDNQPKTGRSDNRGMAVVVLDALTRRQWVREEDLAK
DLKLHSKQLRRTLRFFEEEKLITRDHRKETAKGAKIYNAAVAATSDGQIGREGEEKIKLH
THSYCCLDYAQIHDVVRYRLQRMKKKLKDELDNRNTVQEYICPDCGRRYNALDALRLISP
NDEFFHCEKCDSELVAESDKLAAEEMGDGDDNARRRRREKLKDMLQKMEVQLKPLMEQLS
RVKDLSVPEFGGLQAWEARASAAARANGDSAANDPSKGSQGQGYGGTPMPFLGETRVEVA
LSGVEVKEEDTKADAGTNSMKVLPPWMIKQGMNLTKEQRGEIKRDSKIDNSSAPMSDDKK
SKVDEKEDEKNIQDEYVKAYYAAILKRQQEQEEATKRQEEELENKSNASNDVIDIPNGRE
VGMKSKRDVYEREDGVEWEEAPTAGRYLQTFITHFPVFISLFGDEQPGLSLCTLSIPYLL
LSEGES
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcgagccgtttaatcggttggtcaagcttgctgcgcgggcattttacgatgac
attgccatgaaaggtgataaccagccgaagactggtaggagcgataacaggggaatggct
gtggtggtcctcgacgctctcactagacggcagtgggtcagagaagaagacttggcaaag
gatttaaagctgcactctaaacaacttcgccgcaccttgcgattttttgaagaggaaaag
ttaataaccagagatcatcgaaaagagacagccaaaggtgcaaagatatataatgccgct
gtagctgccactagtgatggtcaaattgggagagagggagaagaaaagattaagctgcac
acccattcatactgttgcttagattatgcacagatacatgatgttgtgagatacagactg
caacgaatgaagaagaaactaaaagatgaactagataacaggaacaccgttcaggagtac
atatgccctgattgtgggagaagatataatgctttggatgctctacgactgatttcccca
aacgatgagttttttcattgtgaaaaatgcgacagtgaacttgttgctgaaagtgacaag
ttagctgccgaagaaatgggagatggagatgacaatgcaaggaggaggaggcgtgaaaag
ttgaaggatatgcttcaaaaaatggaggtacagctaaagccattgatggaacaactttct
agagtaaaggatttatctgttcctgaatttggcggtctccaagcatgggaagctagagct
agtgctgctgcccgtgcgaatggtgattctgctgccaatgatccatctaaaggttctcag
gggcaaggatatggtggaacgccaatgccgtttcttggagagacaagggttgaagttgcg
ctctctggtgttgaagtcaaggaagaggataccaaagctgatgctggaactaattctatg
aaagttctgcctccttggatgatcaagcaaggcatgaatcttacaaaagagcaacgtgga
gaaatcaagcgggattcgaagattgacaatagttcagcacccatgtctgatgacaagaag
tccaaagttgatgaaaaagaggatgaaaagaatatacaagatgagtatgttaaagcttat
tatgccgctattctaaagcggcaacaggagcaagaagaagctaccaagaggcaagaagaa
gaactggaaaacaaaagtaatgcctcaaatgatgtcattgatatacctaatggtcgtgaa
gttgggatgaaatcaaaacgagatgtgtatgagagggaagatggtgttgaatgggaagag
gctccaactgcaggtagatatttacaaacctttattacccattttccagtttttatttct
ctttttggagatgaacaacccggcctatctttgtgcaccctttcgataccatatttactc
ttatcagagggagagagctga
DBGET
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