Telopea speciosissima (New South Wales waratah): 122665716
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Entry
122665716 CDS
T07910
Name
(RefSeq) formin-like protein 5 isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03013
Nucleocytoplasmic transport
tss03015
mRNA surveillance pathway
tss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122665716
09122 Translation
03013 Nucleocytoplasmic transport
122665716
03015 mRNA surveillance pathway
122665716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122665716
03041 Spliceosome [BR:
tss03041
]
122665716
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122665716
Spliceosome [BR:
tss03041
]
Complex C
Other components
EJC/TREX
122665716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
122665716
NCBI-ProteinID:
XP_043717801
LinkDB
All DBs
Position
1:6846598..6862671
Genome browser
AA seq
687 aa
AA seq
DB search
MSSQYPVLDSRPIDQWKVAELKEELKRRKLTTKGLKDDLIKRLDEAIRNEREAASEEEFV
NGIDCDTKEVKSKEAERKLIDTEIIKDTEDGREIKTQAAEYTKDGSENKFQASKDTNEGR
EIKTQAADDDESVVDIDDSIPEIAQGKAKAEESTGNTDPVAVVDEPVVNAVSVETTITVS
HTMVTQSACSEQESQNNETKTENEDQKPLQEDAVLNASDPNNQVSEVSPVLGFQVKCESI
STDSVSIIEKNELKDNLNADNFHLDLEVKPEMVQPSSSDVPPNDGNVHPLDDQEPCENQG
SVEDIDDTNNPNLDISKKNDSADGGYSEKLNLDRSSGDDSMEEDVMESKQIDSIHNSEEL
RDSNELTEVRVVKEERHVDAVGGGFSSEKKEVPDDNKTCHAVPAEKRKLEDQEAVGNIEP
PKRQRRWNSENIEVPQLQVSNFTPSTTPKDASHSTFPKRNFTRSNSNISEESPKERVVPP
SPKPPTTSLRIDRFLRPFTLKAVQELLTKTGKVSSFWMDHIKTHCYVTYSSVEEAIETRK
SLYNLQWPSNGGRLLVAEFVDPQEVKMRAEAPPQPQAPPVSTSPATPGAPSNFQTPLTTV
RQHGLRQQLPPPPPLPPPPPPPPMSDQPTARERLPLPPPPPPLKKQEPPIVTLDDLFRKT
KATPRIYYLPLSDEQVTAKLAAREKKA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcagtaccctgttcttgacagccgacccattgatcaatggaaagtggcagag
ttaaaggaagaacttaagagaaggaagcttacaacaaaggggctgaaggatgacctgata
aaacggttagacgaagcgattcgaaatgagagagaagctgcttctgaggaagaatttgtt
aacggtattgattgtgataccaaagaggttaagagtaaagaggcagagcgaaagctgatt
gacactgaaatcatcaaagacactgaggatggtagggaaattaaaacccaagctgcagaa
tatactaaggatggcagtgaaaataaattccaagcttccaaagatactaatgagggcaga
gaaattaaaacacaagcagcagatgatgatgagtctgttgtcgatatcgatgacagtata
cctgagatagctcaagggaaagcaaaagctgaggaatcaactggtaatacagatcctgtt
gctgttgttgatgaaccagtagtcaatgcagtgtctgtcgaaaccacaatcacagtcagc
cacaccatggtaactcagtcagcatgtagcgagcaggagtcgcagaacaatgaaaccaag
acagagaatgaggatcaaaagcctctccaggaagatgctgtgctcaacgcttccgatccg
aacaatcaggtatctgaggtcagccctgttttagggttccaagtaaagtgtgagtctatt
tctactgattctgtgtcaattattgaaaagaatgaactaaaggataatttgaatgctgat
aatttccatttagacctagaagttaagccagagatggtgcaaccatcatccagtgatgtt
cctcctaatgatggcaatgtacatccactggatgatcaagagccatgtgagaaccagggc
tctgttgaagatattgatgacaccaacaaccctaatctggacattagcaagaaaaatgat
agtgctgatggggggtactcagaaaaattaaatttagaccgaagttccggtgacgactca
atggaggaggatgtaatggagagtaagcagattgattctattcataattctgaagaattg
agagatagcaatgagctaactgaagtgcgtgttgtaaaagaggaaagacatgttgacgct
gtgggaggtggcttctcttctgagaagaaggaagttcctgatgataataagacttgtcat
gctgttcctgctgagaaaagaaaacttgaagatcaagaagctgttgggaacattgaacct
ccaaaacgacagcgtcgatggaattctgagaatattgaagttccccaactgcaagtctct
aatttcactccttctacaacaccaaaagatgcttctcactctaccttccccaaacgaaac
ttcaccaggtccaactcaaacataagcgaagaatcacccaaggaacgtgttgttccacct
tcaccaaaacctccaacgacatcccttagaatcgatcgttttctccgtccatttactctc
aaagcagtgcaagagcttctaaccaaaactggaaaagtctctagtttctggatggatcac
atcaagacacactgctatgttacgtattcatcggtagaagaagccatcgagactcgaaaa
tcgctgtacaacttacagtggccttcaaatggaggacgactcctggtggccgaatttgtt
gacccccaggaagtgaaaatgcgggctgaagctcccccccagccccaagcaccacctgtc
agcaccagtccagcaacacctggagccccttcaaacttccagaccccattgactactgtt
cgtcaacatgggctgcggcagcagcttccacccccacctccactcccaccaccaccaccg
ccaccaccgatgtctgaccaacccacagcaagggaaaggctgcctcttccacccccacct
ccacccttgaagaagcaagaaccaccaattgttacccttgatgatctgttcaggaagact
aaagctacccctcggatatattacctgcctttatctgatgagcaggtcacagcaaaactt
gcagcacgagagaaaaaggcatga
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