Telopea speciosissima (New South Wales waratah): 122665839
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Entry
122665839 CDS
T07910
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00040
Pentose and glucuronate interconversions
tss01100
Metabolic pathways
Module
tss_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122665839
Enzymes [BR:
tss01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122665839
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Ortholog
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
122665839
NCBI-ProteinID:
XP_043717906
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All DBs
Position
6:complement(46315283..>46316701)
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AA seq
342 aa
AA seq
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QLRGKTDSTQAFLSAWAGACGSFDSAIIYVPPGRYLLNQARFNGNCKNTNITIRIDGTLV
APTDYRVIGNAGTWLLFDKVIGVSIYGGSLDGQGSDLWACKAAGNTCPTGATNLGFTNLK
YIVINGLTSLNSQIFHIVIDGCNNVNIQGVTVAAAGNSPNTDGIHVQMSTGVTIIGASIK
TGDDCISIGPGTSTLWIERISCGPGHGISIGSLGKTLQEPGVLNMTVKNVTFTGSENGFR
KKSWGRPSNGFARGILFQDAIMQNVDNPIVIDQNYCLHEEDCPGKVQYYKGHFGKVVCYP
CSYCGGIILEDVQLTYQNQQAESSCVNAGGIAYGVVEPSNCL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
caacttaggggcaaaaccgactcgactcaagcattccttagtgcatgggcaggcgcttgt
ggctcttttgactccgccatcatctatgtgccgccggggcggtatttacttaatcaagcc
cgtttcaatgggaattgtaagaacacaaatatcacaataaggattgatgggacccttgtt
gccccaacagattatcgtgttatcggcaatgccggaacttggcttttgtttgataaagtt
atcggtgtttccatctacggtggatcacttgatgggcaaggatcagatttgtgggcttgc
aaggctgctggaaatacttgccccaccggagctacgaatctaggatttacaaacttgaaa
tacatcgtaatcaacggattaacatcgctaaatagccaaatcttccacattgttatcgac
ggctgcaataatgttaacattcaaggggtgacagttgcagctgcagggaatagtcccaac
actgatggcattcatgtacaaatgtcaaccggtgttacgatcattggcgctagcattaag
accggcgacgattgcatctcgatcggtccgggcacctctaccttgtggatcgagcgcata
tcttgtgggcctggacatggcatcagcataggaagccttgggaagactcttcaagaacca
ggggtgctaaacatgacagttaaaaacgttacattcacaggtagtgagaatgggtttaga
aaaaaatcatggggaaggcccagcaatggattcgcaaggggtattcttttccaagatgca
atcatgcaaaatgtcgacaaccccatagtaattgaccaaaattactgcttacatgaggaa
gattgccccggaaaggtacaatactacaagggtcattttggaaaggtagtttgttatcct
tgttcttattgtggcgggattattttggaagatgtacaacttacttatcagaatcaacaa
gcagaatcatcttgtgtcaatgcaggaggaatagcttatggtgtagttgaaccatctaac
tgtttgtag
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