Telopea speciosissima (New South Wales waratah): 122666135
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Entry
122666135 CDS
T07910
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
122666135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tss03400
]
122666135
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
122666135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
122666135
NCBI-ProteinID:
XP_043718198
LinkDB
All DBs
Position
6:67289119..67291768
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AA seq
650 aa
AA seq
DB search
MEEEEEESQRDGNEKVRSLIEIATNSTAPDVDLRILKSIKLVVRSSDSELRLAVETLMEK
MKKNHSQVRYLALLIIDELFMRSKLFRSLFVVNFDQFLSLSVGFGRNYQLPEPNGIAVKL
RSKAMEFLEKWNDSFSIHYRQVRLGFDYLKNTLRFQFPNIQQNASRIQQERREREMRSKE
ILQNKFASLRETIASYKGEILLTVDEIEECLQILNSKNELMTLDALEEDEVEEFRCSALQ
QIRLASLKEGHKVHENNDNQAVFDVLRELYKLLVTKHLVSLQEWMVVLVRVETEDVRFRD
STLKDLIDIRNRLLSVKKRCEESGCALPNPINREEEDLWEEGKIEVFDGGNCGEPSKPCE
DIGSTSTLKEKKNAARNTDPSGSKTVDHAVDGSDITSLKGKLLAEAPVMTWGSFLDSWGS
NRDVLANQRGLELESHWGRVDYDAVIPAEKIAELNVQTTLYKENNVEILPCHAPLSKGGL
CQRRDLKVCPFHGPIIPRDSKGNPIIENSSTDDKTLDLGSKIVEQLAKQAVKNVRDRDGD
EAKQKANDKKSLKRAKLAKVREHNEAVLRQSALTSTSRSAKFGDALESVGVNKTVAREKK
QTLASMLRKKITPKDRLAKRLLNSRATDATVRQLTFGEDAKYREAFPNQW
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggaggaggagagtcagagagatgggaatgagaaggtgaggtcgttgatc
gagattgcaacgaactcaacggctccagatgtcgatcttcgaattctcaaatccatcaaa
ttggtcgttcgttcctccgactctgaacttcgactcgccgtcgaaaccctaatggaaaag
atgaagaaaaatcactcccaggtaaggtaccttgcacttctcataatcgatgagttgttc
atgcggtcaaagctatttagatccctatttgtcgtgaactttgatcagtttttgagtttg
agtgttggtttcggaaggaactatcaactccctgaacctaatggtattgcagtgaagctt
cgttcgaaagcaatggagtttttagagaaatggaatgattcatttagcatacattacaga
caggtgaggttaggatttgactacttgaagaatacccttcggtttcagtttccaaatatt
cagcaaaatgcatctcggatacaacaagagagaagagagagagagatgaggtcaaaagaa
attttacaaaacaagtttgcctctcttagggaaaccattgcttcatataagggtgaaatt
ctgttaacagttgatgaaatagaggaatgtttgcagattcttaattccaaaaatgaatta
atgacattggatgccttggaggaggatgaagttgaagaattccggtgctctgctttacaa
cagattcgtcttgcttcattaaaagaagggcacaaggtccatgagaacaacgacaatcaa
gctgtttttgatgtactgagggaactgtacaagctcctagtgacaaaacatctggtctca
ttgcaagaatggatggttgttcttgtgagggttgaaacagaagatgtcagatttagagat
tccacattgaaagatctcattgatattcgaaatcgtctgctatcagtgaagaagagatgt
gaagaatctggttgtgctcttcccaaccctatcaatcgtgaagaagaggatttgtgggag
gagggtaaaatagaagtttttgatggtgggaattgtggggaacctagcaagccatgtgaa
gatattggcagtacgtcaactctgaaggaaaagaagaatgctgcccgcaatacagatcca
agcggcagtaagaccgtggatcacgcagtagacggttctgatataacctctcttaaggga
aagcttttggccgaagctcctgttatgacttggggatctttcctggatagttggggttca
aaccgcgatgttttggctaaccagagaggactggagcttgagagtcactggggccgggta
gactatgatgcagttattccagcagagaaaattgctgaattgaatgttcagactacatta
tacaaggaaaacaatgttgaaatcctaccgtgccatgctcctttgagtaagggaggactt
tgtcagagaagagatttgaaagtttgcccgtttcatgggcccatcataccacgagattct
aaaggaaatccaatcattgaaaattcatccacggatgacaaaactcttgatttggggtct
aaaatagtcgagcaattggccaaacaggcagtgaagaatgtgcgagatagagatggagat
gaagcaaaacaaaaggcaaatgataaaaagtcactgaagcgtgcaaaacttgcaaaagtt
cgtgagcacaatgaagcagtcttgcgtcaatctgcacttacatcaacctcacggtctgct
aaatttggagacgctttagaatcagtgggtgtgaacaaaaccgtggccagagagaagaaa
caaacacttgcatcaatgctgcgtaagaaaattaccccaaaagatagattagcgaagagg
cttttgaattctcgtgcaacagatgcaacagtaagacagctgacattcggggaggatgca
aaatatcgggaagcttttccaaatcaatggtag
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