Telopea speciosissima (New South Wales waratah): 122667053
Help
Entry
122667053 CDS
T07910
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03013
Nucleocytoplasmic transport
tss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122667053
03015 mRNA surveillance pathway
122667053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122667053
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122667053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
122667053
NCBI-ProteinID:
XP_043719168
LinkDB
All DBs
Position
1:complement(9411736..9429929)
Genome browser
AA seq
409 aa
AA seq
DB search
MAKPGRGRPATPSGSDSGSSSPSRSRSTSGSDSRSRSRSRSISSSSSRSRSVSSGSKSPP
PQRRSPAGTARRRPSPPPTKRVSPPPRKASPVLESVVLHIDKLTRNVNEGHLREIFSNFG
EVVNVELSMDRIVNLPRGYGYVEFKTRADAEKALLYMDGAQIDGNVVQARFTLPPRQKVS
SPPKAIPATQKREAPQKDNVGADVEKDGQRQRESSPRRKPLSPPRRRSPVAHRRGESPRR
RPESPPRRRVESPVRRRGESPYRRGETPPRRRPASPVRRRSPSPLPRRHRSPARASPRRI
RGSPVRKRSPVPLRRRSPPRRARSPPRRSPIRRRSRSPVRRPARSRSRSVSPRRGRALAQ
RRGKSSSYSGSPSPRKGARKISRSRSPRRPGRGRSSSNSRSSSSPPPKP
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacctggtcgtggtcgtccggccacgccttcgggctcggactcgggttcgtct
tctccgtcccgctctcgctcgacttctggttcagattcacgttctcgttcacggtctcgc
tccatttcttcctcttcctctcgttctcggagtgtcagctctggcagcaaatcccctccg
ccccagagaagaagtcctgcaggaacagccaggcgtcgtccgtctcctccaccaactaaa
cgggtttcacctccaccaaggaaagcatctccagttctcgagtctgtagttctgcacatt
gataagctaaccaggaatgtgaacgaaggacatttaagagaaatattcagtaactttggt
gaagtagttaatgtggaactgagtatggatcgtattgtaaatcttcctcgtggatatggc
tatgtggagttcaagacgagggctgatgcagaaaaagccctactttacatggatggtgct
caaattgatgggaatgttgttcaagcaagattcaccttacctccacgccagaaagtgtca
tcccctccaaaggctattcctgccactcagaaaagagaagctccccaaaaggataatgtt
ggtgctgatgttgaaaaggatgggcagcgccagagagaatcttctccacgccgcaaacct
ctttcaccaccacgaaggagatcccctgtagcacatcgaagaggtgaatcaccccgaagg
cggccagaatctcctccacgacggcgtgtagagtccccagttcgtcgccgaggagaatct
ccttatcgtcgtggtgaaacacctcccagaagaaggcctgcatctccagttagaagacgt
tctccatcacctcttccaaggcggcacaggtctcctgcacgagcttctccccgaagaata
cgtggtagtccagtccgcaagcgctcccctgtcccgctgaggcgacgatctcctcctaga
cgagctcgtagtcctcctagaaggtcaccaatccgtcggcgtagccgctctcctgttcgt
aggcctgctcggtcacgttcaagatcagtctctcctcgcaggggtcgagcactggctcaa
agacgtggaaaatcttcatcctattctggatcaccaagtcctcgcaagggagcaaggaaa
atttcaagaagtcgtagcccaagaaggcctggccgaggaagaagcagtagcaatagccgt
agcagcagttccccgcctcctaaaccataa
DBGET
integrated database retrieval system
