Telopea speciosissima (New South Wales waratah): 122667059
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Entry
122667059 CDS
T07910
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic-like isoform X1
KO
K02945
small subunit ribosomal protein S1
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
122667059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tss03011
]
122667059
Ribosome [BR:
tss03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
122667059
Bacteria
122667059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
122667059
NCBI-ProteinID:
XP_043719172
LinkDB
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Position
7:complement(5628319..5636117)
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AA seq
512 aa
AA seq
DB search
MRSLHHPCSCNSLSFLNLSSPPNFSKSTIPNVHRCLVSVNTNYFPVSITGTPESSVFSSN
SLISKRTQVPFCSSTDEFMQFGGTHVSNKPENERFQEMEELELLGKPAPLPVNGGSLTDV
DSGSQKPDKDDALAPFLKFFKDRDSDEDSDLKVTKGEESQMVIVEYYEPKPGDLVVGVVV
SGNENKLDVNVGADLLGAMLTKEVLPLYDQEFPYLLCDMEKDAEEFMVPGKMGIIRDEDA
VSGEPVPGRPVVEVGTVLFAEVLGRTLSGRPLLSTRRLFRRIAWHRLRQIKQLNEPIEVR
ITEWNTGGLLTRIEGLRAFLPKGELMGRLNTFTDLKENVGRRMYVLICRIDEATNDIIIS
EREAWEMLHLQDGTLLHGTVNKIFPYGAQIRIGETNRSGLLHISRITRVRVGSVSDLLTV
DEKVKVLVVKSTFPDKISLSIADLESEPGLFLSNKERVFSEAEVMAKKYRQKLPVVSATR
KLDDLQTDLLFDDEAKLYSNWKWFKFEEDNSD
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcggagcctccaccacccctgtagctgtaactccctcagcttcttgaacttgtccagc
ccacctaatttcagtaagagcacaattccaaatgtccatagatgcctcgtttcagttaac
acaaactactttcctgtttccattaccgggactcctgagagttcagttttctcctcgaat
tctttgatttcgaaaagaacccaggtccccttttgctcgtccactgatgagttcatgcaa
tttggaggtacccatgtttcgaataagcccgaaaatgagagatttcaggaaatggaagag
cttgaattgctgggtaagcctgcgccattacctgtaaatggtggttctttaacagatgtg
gattcggggtctcagaaacctgataaagatgatgccttggctcctttcctgaaattcttc
aaggatagagattctgatgaagacagtgacttaaaagtgactaaaggggaggagtcgcag
atggtcattgtagagtattacgagccaaaacctggtgacttggtagtgggagttgttgtg
tctggtaatgagaataagctcgatgtgaacgtcggtgctgatcttctgggggcaatgctg
accaaggaagtgctccctctctatgatcaagagtttccctatctgttatgtgacatggaa
aaggatgctgaggagtttatggttcctgggaagatgggaattatcagggatgaggatgca
gtgagtggggaacccgtaccagggaggcccgtcgttgaagtaggtacagttcttttcgct
gaggtcctcggccgaacacttagtggacggcctttgctttccacgaggcggctctttcgg
cggattgcgtggcatcgactgaggcagataaaacagctcaatgaacctattgaggttaga
attacagagtggaatacgggtggccttcttacaagaattgagggtctgcgagcattcctt
cctaaaggtgagttgatgggtagacttaacaccttcacagatttgaaagaaaatgtggga
cgacggatgtatgtgctgatttgtagaatagatgaagctactaatgatataataatcagt
gagagagaagcttgggaaatgttgcaccttcaagatggaacacttctacatggcactgtt
aataaaatttttccgtatggggcgcaaataaggataggtgagaccaatagaagtgggttg
ctgcatatctcaagaataacgcgtgtccgagttggttctgtcagcgatttgctaacagtg
gatgagaaggtgaaagttctggtggtgaagtcaacgtttcctgataaaatatcactaagt
atagcagatctcgaaagtgagcctggcctatttctttcaaacaaagagagagtattttct
gaggctgaagtgatggctaaaaagtacaggcaaaagttaccagttgtttctgcaactcgt
aagctagatgaccttcaaaccgatcttctatttgatgacgaagcaaaattatattcaaac
tggaagtggtttaaatttgaagaagacaacagtgactga
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