Telopea speciosissima (New South Wales waratah): 122667126
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Entry
122667126 CDS
T07910
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03082
ATP-dependent chromatin remodeling
tss03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122667126
03083 Polycomb repressive complex
122667126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tss03036
]
122667126
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
122667126
Histone modification proteins
HAT complexes
HATB complex
122667126
HDAC complexes
Sin3A-HDAC complex
122667126
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
122667126
PRC2.2
122667126
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
122667126
Heterochromatin formation proteins
Other heterochromatin formation proteins
122667126
Chromatin remodeling factors
NuRD complex
122667126
NuRF complex
122667126
NuRF complex (fruit fly)
122667126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_RIG_1st
DUF3798
Motif
Other DBs
NCBI-GeneID:
122667126
NCBI-ProteinID:
XP_043719260
LinkDB
All DBs
Position
7:complement(61780471..61803335)
Genome browser
AA seq
466 aa
AA seq
DB search
MRERGKAGQPSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLY
LSEQTDGSVPNTLVLANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRE
LQQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAAESRPDLILTGHQDNAEFALAMCPTE
PFVLSGGKDQSVVLWSIEDHICASATEPGSAKSPGSGSSSIKHISKGGDKAADSPTVGPR
GIYLGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDARTGTSPAIKVEKAHNADLHCIDW
NPHDENLILTGSADTSVRMFDRRNLISGGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSS
AEDGFLNVWDHEKVGKKKERVGTRMPNSPPGLFFQHAGHRDKVVDFHWNACDPWTIVSVS
DDCESTGGGGTLQIWRMSDLIYRPEEEVLTELEKFKSHILTCSSKA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgagggagagagggaaagcagggcagccatcggtggacgagagatacacacaatggaag
tccctggttcccgtcctctacgactggcttgccaaccacaaccttgtctggccttctctc
tcttgccggtggggtccccagctagagcaagcgacatacaagaatcgtcagcgtctttat
ctttcggaacagactgatggtagtgttccaaacacacttgtactggctaattgtgaagta
gtgaaaccaagggttgctgcagcagagcacatatcacagtttaatgaagaagcccgctct
ccctttgtgaagaagttcaaaactattattcatcctggagaagtgaacagaattagggaa
ttgcagcaaaacagtaagatagtggcaacccatactgatagtcctgatgttctcatttgg
gacgttgaggctcaacctaatcgtcatgctgtcctgggagctgcagagtctcgaccagat
ctgatattgactggacaccaagataatgctgaatttgcgctggcaatgtgtccaactgaa
ccttttgttctttctggaggaaaagaccagtcagtggtcctatggagtattgaagatcat
atctgtgcttcagccacagaaccagggtctgcaaaatctccagggtctggaagctctagt
attaagcatatctcaaagggtggtgataaagctgcagacagtccaactgttggaccacga
ggcatctatctagggcatgaggatactgttgaagatgtgcaattctgtccttcgagtgcg
caggagttctgcagtgtgggtgatgattcttgccttatactatgggatgcacgaactggc
actagtccagccatcaaggttgagaaagctcataatgctgatcttcactgcattgattgg
aatccacatgatgaaaaccttattttgactgggtcagctgatacttctgttcgtatgttt
gaccgccgaaacctcatttctggtggtgttgggtcacccatctataagtttgaaggtcac
aaagctgctgttctttgtgtgcagtggtctccggacaagtcatctgtttttggcagttct
gcagaggatggtttcttaaatgtttgggatcatgagaaggttggtaaaaagaaggaacgt
gttggaacaagaatgccaaattctcctccgggcttgttcttccaacatgctgggcacagg
gataaagttgttgactttcattggaatgcttgtgatccatggactattgttagtgtgtcc
gatgattgtgagagtactggtgggggtggaacattgcagatatggcgcatgagcgacttg
atttatagaccagaagaggaggttctcactgagctggagaagttcaaatcacacatactg
acatgttcttcaaaagcctga
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