Telopea speciosissima (New South Wales waratah): 122667335
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Entry
122667335 CDS
T07910
Name
(RefSeq) protein CELLULOSE SYNTHASE INTERACTIVE 3
Organism
tss
Telopea speciosissima (New South Wales waratah)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_2
C2
V-ATPase_H_N
HEAT_EZ
HEAT
DUF3385
V-ATPase_H_C
Motif
Other DBs
NCBI-GeneID:
122667335
NCBI-ProteinID:
XP_043719526
LinkDB
All DBs
Position
7:complement(9377431..9416285)
Genome browser
AA seq
2129 aa
AA seq
DB search
MSKSPSSEPRHRRSWSTPPRESNGPAGMDDSESTMATVAHFIEQLHANMSSQHEKELITT
RLLSITRARKDVRMLIGSHTQAMPLFISILRSGTTAAKVNVATTLSALCKEEELRLKVLL
GGCIPPLLSLLKSESIEARKAAAEAIYEVSCGGLSEDHVGVKIFVTEGVVPTLWDQLNPN
IKQDKMVEGFVTGALRNLCRDKNGYWNATLEAGGVDNIIGLLSSDNAAAQSNAASLLARL
MSAFSDSIPKIIDAGAVEALLQLVGQENDISVRASAADALEALSSKSTTAKKAVVDAHGI
SVLIGAVVAPSKECMQGEGGQDLQGHTIRALANICGGLSALILYLGELSQSPRLAAPVAD
IIGTLAYSLMIFEQASDVEEPFDVTQIENILIMLLKPRDNKLVQERVLEAMASLYGNTYL
SRWLNHAEAKKVLIGLITMASADVQEYLILSLTSLCCDGVGTWEALGKREGIQLLMSLLG
LSSEQHQEYAVAMLAILTDQFDDSKWAITAAGGIPPLVQLLEIGSQKAREDAAHVLWNLC
CHSEDIRACVESAGAVPAFLWLLKNGGPKGQEASAMALTKLICFADSAAINQLLALLRGD
SPSSKAQIIKVLGHVLTMASEKDLVHKGAPANNGLRSLVQVLNSSNEETQEYAASVLADL
FSTRQDICDSLATDEIVKPCMKLLTSKTQVVARQSARALGALSRPTKTNSKKVSYVAEGD
VKPLIKLAKNSSIDAAETAIAALANLLSDPQIAAEALAEDVVSSLTRILGEGTLEGKKNA
SRALHQLLNHFPVGEVLRGNAQCRFTVLAIVDSLSTMDMEGSDATDALDVVALLARTKPS
VNFTYPPWAALAEVPSSLEPLVRCLADGLPPSHDKAIEILSRLCGDQPVVLGDLLVARPN
SIVSLAHRIMNSSSLEVRVGGAALLICAVKEHKMQSINALDASGFLKPLIYTLVDMMKHT
SSCCNLEIEVRTPRGYMERTVFQDGDDFDIPDPATVLGGTVAAWLLSIISSFHKKNKITV
MEAGAVEALADKLSTYTANPLAEFEDTEGLWISALLLAILFQDANVVLSPPTMRIIPLLV
LLLKSDEVIDRYFAAQAMASLVCCGSRGIHLAVANSGAVAGLITLIGYIESDMPNLVALS
EEFFLVHNPEQVVLERLFEIEDVRFGSTVRKSIPLLVDLLRPMPDRPGAPPTAVHLLTCL
ADGNDANKLAMADAGALDALNKYLSLSPQDSTEATISELLRILYGNSDLLRHEASLSSMN
QLIAVLRWGSRNARFGAARALHRLFDARNIRESELAGQAIQPLLDMLSSGTEREQQAALV
TLIKLNPNASLFTDVEGNPLDCLYKILTSVSSLELKRNAAQLCFLLFGNSKMRAMPIASE
CIEPLISLMQSNTRTAVESGICAFERLLDDEQQVELAAAFDVVDLLVGLISVSNHLHSEA
SINSLIKLGKDRTHLKLDMVKAGVIDNCLELLTDAPSSLCTSVAELFRILTNSSGIAKSS
AAARIVEPLFLVLFRPDVSLWGQHSALQTLVNILEKPQSLSTLRLTPSQVMQPLISFLES
PTQAIQQLGTELLSHLLAQEHFQRDITTQNAIIPLVQLAGIGILNLQQTAIKALESISMS
WPKAVADAGGIFELSKVIIQDDPQPPHVLWESAALVLSNVLRFNAEYYFKVPLVVLVRML
HSTLESTITVALNALIVQEKNDASSAEQMAEAGAIDSLLDLLRSHQCEEASGRLLEALFN
NIRVREMKISKYAIAPLSQYLLDPQTRSQSGRLLAALALGDLFQHEGLARASDSVSACRA
LVSLLEDQPTEEMKMVAICALQNLVVQSRTNRRAVAEAGGILPIQELLLSQNSEVAAQAS
LLIKFLFSNHTLQEYVSNELIRSLTAALEKELWSTKTINVEVLRTINVIFSNFSKLHVSE
AATLIIPHLVGALKGGDEAAQESVLDTLCLLKQSWSTMPIDIAKAQAMIAAEAIPILQLL
MKTCPPSFHERADGLLHCLPGCLTVTIKRGNNLKQTVGYTNAFCRLTIGNGPPRQTKVVS
HSTCPEWKEGFTWAFDVPPKGQKLHILCKSKNTFGKSTLGRVTIQIDKVVTEGVYSGFFS
LNHDKKKDGSSRTLEIGIIWSNRMSNESM
NT seq
6390 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatctccttcctctgaacctcgacaccgaagatcttggtctactccgcctaga
gaatcaaatgggccagcaggaatggatgattcagagtctacgatggctacagttgctcat
tttattgagcagctacatgcgaacatgtcatcacaacatgagaaggagcttatcacgaca
cgcttactcagtattactagagcaaggaaggatgtgaggatgcttattggttctcataca
caggcaatgcctttgtttatatccattctcaggagtggtactactgctgccaaagttaat
gttgctacaactttgagcgctctctgcaaggaagaagaattacggttaaaggtacttctt
ggtggatgcataccaccattgctctcacttctgaagtcagaatcaattgaagccaggaag
gctgctgccgaggcaatctatgaagtttcgtgtggtggactatcagaagatcatgtgggt
gtgaaaatatttgtgactgaaggtgtagtgcccactctgtgggatcaactcaatccaaat
atcaagcaggacaagatggtggagggatttgtcactggggccttgaggaatctttgtagg
gacaagaatggctactggaacgccacactcgaggcaggaggggtagataatatcattgga
cttctttcttctgataatgctgctgctcagtccaatgctgcatctcttttggctcgtttg
atgtcagctttcagtgatagcatcccaaaaattatagatgctggagctgttgaagctttg
cttcaactagttggtcaggaaaatgatatatcagttcgagccagtgctgctgatgccctg
gaagctctttcatccaaatcaactactgctaagaaagctgtggtggatgcacacggtata
tctgtcctcattggagctgttgttgctccttctaaagaatgcatgcaaggggagggtggc
caggatctacagggacacacaatacgcgctttggcgaatatatgtggtggactgtctgct
ctaatactgtatcttggagaactatctcagtccccccgcttggctgctcctgttgctgat
ataattggcacacttgcatactcgctgatgatctttgaacaagcatctgatgttgaagaa
ccatttgatgtaacacagatagaaaatattctgataatgctactaaagcctcgagataat
aaactagttcaggagcgtgtcctcgaggctatggctagcctttatggcaatacatacctc
tcaagatggctcaatcatgcagaagcgaaaaaggtgctcataggactcataaccatggcc
tcagctgacgtgcaggaatatctgatactctcattaacgagcttatgctgcgatggggtt
ggtacctgggaggccctaggaaagagagagggtattcagttattaatgtcattgctggga
ttgtctagtgaacaacatcaagagtatgctgtcgcaatgctggcaatcttgacagaccaa
tttgatgacagcaaatgggcaatcactgccgctggtggtattcctccactagtgcagtta
ttggagataggatctcaaaaggcaagggaagatgcagcacatgtgctgtggaatttgtgc
tgtcacagtgaagacatacgtgcctgtgttgaaagtgccggagctgtcccggcattcctc
tggcttctaaaaaatggtggaccaaaaggacaagaagcttcagcaatggcacttacaaag
cttatttgttttgctgactctgccgccatcaatcagctattggctttgctccgaggagac
tctccaagttcaaaggctcaaattattaaggtgttgggtcatgtgcttaccatggcatca
gagaaagatcttgtgcataaaggagctcctgctaataatggcctcagatctcttgtccag
gttctcaactcttcaaatgaggaaactcaagagtatgctgcttctgttttagccgaccta
tttagcactagacaagacatctgtgatagccttgcaactgatgagattgttaaaccttgc
atgaagctcttgaccagcaaaactcaggttgttgctagacagtcagctcgggcattgggt
gcattgtcccgtccaaccaagactaactctaaaaaggtgtcttatgttgcagaaggggat
gtcaagccattaattaagctggcaaagaattcatccattgatgctgctgagactgcaata
gctgcattggctaatctgctctctgatcctcagatagctgcagaagctttggcagaagat
gttgtctcatctttgacaagaatactaggagaaggcactttggaaggcaagaagaatgca
tcacgtgcccttcatcaattattaaaccattttccagttggggaagtacttagaggaaat
gcgcagtgccgtttcacagttcttgcaattgttgattccttatctacaatggacatggaa
ggaagtgatgccactgacgctctagatgtagttgcattgttggctaggacaaaaccaagt
gtgaacttcacatacccaccatgggctgctcttgctgaagttccctcaagcttagagcca
ctggttcgctgcctggctgatgggcttcctccctcacatgataaggcaatagaaatcctg
tccaggctatgtggtgatcaaccagttgtcttgggtgaccttctggttgcccgtccaaac
tctattgtttcacttgctcatagaataatgaactcatccagtttagaagtgagagttgga
ggtgctgcattactcatttgcgctgtgaaggaacacaaaatgcagtcaatcaatgcactt
gatgcatcaggttttctaaagcctctcatttataccctagtagatatgatgaaacatacc
tctagctgctgcaatctggaaattgaagtcagaaccccaagaggttatatggaaagaact
gtattccaagacggggatgatttcgatattcctgatccagccactgtattggggggaaca
gttgctgcgtggttgctgtcaataatttcttcatttcacaagaagaacaaaatcactgtc
atggaggctggtgcagtggaggctcttgctgataagctttcaacttataccgccaaccca
ctggcagaatttgaagacacagaaggcctttggattagtgcgctgcttttggccattttg
ttccaggatgcaaatgttgttctatctcctcccacaatgcggattataccattacttgtt
ctcctactcaagtctgatgaagtgattgatagatactttgccgctcaagcaatggctagt
cttgtttgctgtggaagtaggggaatacatctcgctgttgcaaattcaggtgcagttgca
gggttaataactctgattggttacatagaatcagatatgccgaaccttgttgctctttct
gaagaattttttttagttcataaccctgaacaagttgttctggaacgcctctttgaaatt
gaagatgtaagatttggctctactgtacgcaaatctataccattgttggttgacctattg
agaccaatgccagataggccaggtgcccctccaactgctgttcacttgttgacctgcctt
gcagatggaaatgatgcaaataaactggctatggcagatgctggagctctagatgctcta
aataagtacctctctctgagtcctcaagactcaaccgaggccactatatctgaactattg
agaatattgtatgggaattctgatctgcttcgtcatgaagcgtcattaagttctatgaat
caactcatagctgttctacgttgggggtcaagaaatgctagatttggtgctgctagggct
ctgcatcggctttttgatgcacgaaacatcagagaatctgaattggctgggcaagccatc
caaccattattagacatgcttagttccggaacagaaagagagcaacaggctgctcttgtt
actctgatcaaattgaatcctaatgcatcattattcactgatgtggaaggaaacccactt
gactgcctgtacaagattttaacatctgtgtcatcattggaattaaagagaaatgctgcg
cagctctgttttttgctatttggtaactcaaagatgcgagcaatgccaatagcctctgaa
tgtatagaacctctgatatcactaatgcagtcaaatacaagaacagcagtggaatctggc
atttgtgcttttgagagattgttggatgatgaacagcaagttgagcttgcagcagcattt
gatgttgtagatcttcttgttgggttgatttctgtgtctaaccacctacattctgaggcg
agcatcaattctcttataaaattggggaaggaccgtactcacttaaaactggacatggta
aaagctggagtcattgataactgtcttgagttgctcactgacgcacctagctcactatgc
acctcagttgctgagttgttccgcatcttaacaaacagcagtgggattgcaaaaagttca
gccgctgccagaattgtggagcctcttttcttggttttattccgcccagatgtcagtttg
tggggacagcatagtgccttgcaaacactagtgaacattttggagaaaccacagagcctt
tcaactctgagacttactccaagccaagtcatgcaacctttgatttcatttctggaatcg
cctactcaagccatccagcagctaggcactgaactactgtctcatcttctagctcaggag
catttccaacgagacattacaacacaaaatgcaatcattcctcttgttcagcttgcagga
attggaatattgaacttgcagcagacagcaataaaggctctagaaagtatatcaatgagc
tggccgaaggctgttgctgatgctggaggtatttttgagctctctaaggttattattcaa
gatgatcctcaaccacctcatgtattatgggaatcagctgcattggtcctctcaaatgtt
ttgcggttcaatgctgaatattatttcaaagttcctctagtggtccttgtgagaatgtta
cactcaacattggagagcactattacagtagctctcaatgccttaattgttcaagaaaag
aatgatgcttcaagtgctgaacaaatggctgaagctggtgcaatagattcactgctggac
cttctaaggtctcatcagtgtgaagaagcatctggaagactactcgaggctctatttaac
aatataagggtgcgagaaatgaaaatttccaagtatgccatcgctcctttatctcagtat
ctattggatccacagaccagatcacagtctggtagacttcttgcagcccttgcacttggt
gacctcttccagcatgagggactcgctagagctagtgattcagtatctgcatgtcgtgca
ctcgttagtttgcttgaagaccagccaactgaagaaatgaaaatggtagcaatatgtgca
ttgcaaaacttggttgtgcaaagtaggacaaatcggcgagctgttgcagaagcaggtggc
atattgccaatacaggaacttctgctatctcaaaattcagaagttgctgcacaggcatca
ttgctgatcaaatttttgttttctaatcacacacttcaggaatatgtatcaaatgagctc
atcaggtccttgacagctgcattggagaaagagctgtggtccacaaaaactatcaatgtg
gaagtcctgagaactataaatgtgatattcagcaacttctctaagctccacgtttctgaa
gcagctaccctcatcatcccacatttagtaggagcactgaaaggtggagatgaggctgct
caggaatctgtattagacaccttatgcttgttaaaacagtcatggtcaaccatgcccata
gatattgccaaagctcaagctatgattgctgctgaagcaattccaattctacagttgctg
atgaaaacttgcccaccgagtttccatgaaagagcagacggcctgttacattgcttgcct
gggtgtttgacagtcaccattaagcgtggaaacaacttgaaacagaccgtgggatacaca
aatgccttctgtcgtctgacgataggaaatggtccaccacggcagacaaaggttgtgagc
cacagtacttgtccagaatggaaagaagggtttacttgggcatttgacgttcctccaaag
ggacaaaaacttcacatcctctgcaaaagcaaaaatacatttgggaagtctactcttgga
agagtgacaatccaaatagataaagttgtgacggagggtgtttacagtgggttcttcagc
ctgaaccatgacaagaagaaagatggatcatctcgaacactagaaattgggatcatctgg
tccaacaggatgtcaaacgagagcatgtga
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