Telopea speciosissima (New South Wales waratah): 122667433
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Entry
122667433 CDS
T07910
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00450
Selenocompound metabolism
tss00970
Aminoacyl-tRNA biosynthesis
tss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
122667433
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122667433
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tss01007
]
122667433
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tss03016
]
122667433
Enzymes [BR:
tss01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
122667433
Amino acid related enzymes [BR:
tss01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122667433
Transfer RNA biogenesis [BR:
tss03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122667433
Prokaryotic type
Other AARSs
122667433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
tRNA-synt_1e
Anticodon_1
CoV_peptidase
Motif
Other DBs
NCBI-GeneID:
122667433
NCBI-ProteinID:
XP_043719636
LinkDB
All DBs
Position
7:25051403..25068014
Genome browser
AA seq
796 aa
AA seq
DB search
MEKATPKVPIEGRRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICG
TDEYGTATETKAMEENCTPQQICDKYHAIHREVYKWFDISFDKFGRTSTPQQTEICQAIF
NKLLENNWLSENTMQQLYCDTCKRFLADRFVEGTCPTLNCNYDSARGDQCEKCGNMLNPT
ELKDPKCKVCKTTPRIRDTEHLFLELPLLKDKLEEYINKMSVAGSWSQNAIQATNAWLKE
GLKQRCITRDLKWGVPVPHEKFKEKVFYVWYDAPIGYVSITACYTSDWSQWWKNPSNVEL
YQFMGKDNVPFHTVMFPSTLIGTEENWTLMKTISVTEYLNYEAGKFSKSKGIGVFGNDAK
DTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNLINRVLSFIAKPEGQG
YASIIPDAPGAESHPLTKKLAEKVGDYVDQYIEAMEKVKLKQGLKTAMAISSEGNAYLQD
SQFWKLFKEDPSSCNIIMRTSAGLVYLLAALLEPFIPSFSVEVLRQLNLPSQHLSLCEGD
IDRARRPWEILPSGHKIGKPEPLFKELKDEEVEFYREKFAGSQADRIEKADATKKVAEQL
KKTKISADGDGKNQKPSKSTADGKSKAAVEAEITISRLDIRVGLITKVQKHPDADSLYIE
EIDVGEETPRTVVSGLVKYIPLEEMQNRKVCVFCNLKPATMRGVKSQAMVLAASNGDHTK
VELVDPPESATVGERVTFPGFVGEPDSVLNPKKKVWETLQVDLHTDSELVAYYKDIPFTT
SAGVCKVASIAEGTIR
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagccactcccaaggttccgatcgaaggccgtaggaacatattgattactagt
gcattgccttacgtcaataacgtccctcacctcggcaacatcatcggctgtgttttaagt
gctgatgtcttcgctcgctactgccgtctcagaggttataacgctatatacatctgcggg
actgatgagtatggaactgcaacggagaccaaagccatggaagagaattgcacccctcag
cagatttgtgataagtaccatgcaattcacagagaggtatacaaatggtttgacattagt
ttcgataagtttgggcgcacatctactccgcagcagactgaaatttgtcaagcgattttc
aataagttattggagaacaattggctttctgaaaacactatgcagcagctttattgtgat
acttgtaaacgtttcttagctgatcgttttgtggagggtacctgtcccacactaaattgt
aattatgattctgcgcgaggggatcagtgtgaaaagtgtgggaatatgttgaatccaacg
gaactaaaggatcctaaatgcaaggtatgtaagacaactccacgtatacgggatacagag
catttgtttctagagctcccgttgctgaaagataagctggaggagtatatcaacaaaatg
tcagtggcaggatcttggagtcagaatgctattcaagccacaaatgcatggctaaaagaa
ggattaaaacaacgatgtattaccagggacctcaagtggggagttcctgttcctcatgag
aaatttaaggaaaaggttttctatgtgtggtatgacgctccaatcggatatgtttcaatt
actgcatgctatacgagtgattggagccaatggtggaagaatccttcaaatgtggaactg
tatcagtttatgggcaaggataatgtgccattccatactgtaatgtttccatctacgctt
attgggactgaagaaaactggacattgatgaagactatcagtgtgactgagtacctaaac
tatgaagcaggtaaattctccaaaagtaagggaattggcgtctttggtaatgatgcaaaa
gatacaaacatccctgttgaagtatggcgatattacttgttaacaaataggcccgaggtg
tcggataccttattcacatgggctgatctgcaagcaaaactgaattctgaattgctcaat
aacttgggaaatcttattaatcgagtgttgagctttatagcaaaacctgaaggccaagga
tatgcttctatcattcctgatgctccaggtgcagaatcacatccattgaccaagaaatta
gcagaaaaagttggtgattatgttgatcaatacattgaggcgatggagaaggttaaacta
aagcaaggattgaagactgcaatggcaatttctagtgaagggaatgcatatttgcaagac
agccaattttggaagctctttaaagaagatccatcttcctgcaacatcattatgagaact
tcagctggactagtatatctgcttgcagctttgttagaacctttcattccatctttttct
gttgaggtattaaggcagttaaatttgccaagccaacatctatcactgtgtgaaggagat
attgatagggcacgaagaccttgggagattctaccttctggtcataaaataggcaagcct
gaacctttatttaaggaactgaaagatgaagaggtagagttctacagggaaaaatttgct
ggaagtcaagctgataggatagagaaggcagatgctacaaagaaggttgctgagcagctg
aagaaaacaaaaatttcagctgatggagatggaaaaaatcaaaagccaagtaaatctacc
gctgatggcaaatcaaaggcagctgttgaagcagaaatcaccatttcaagacttgatata
cgtgttggcctaattacgaaagttcagaagcatccagatgctgattccctttacattgaa
gagatagatgtgggtgaagaaacacctaggacagtcgttagtggccttgtcaagtatatt
cctcttgaagaaatgcagaatcggaaagtttgtgttttctgcaacctgaagccagcaacc
atgcggggtgtcaaatcacaagccatggttcttgcggcttcgaatggagaccatacaaaa
gttgaattggttgatccacctgaatctgctaccgtgggggagagagttacatttcctgga
tttgttggtgagcccgacagtgttctgaatcccaagaagaaggtttgggaaacactgcaa
gtggatctccacacagattcagagttggtcgcctactataaagacatccccttcacgaca
tcagcaggtgtttgtaaggttgcatccatcgcggaaggcaccattcggtag
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