Telopea speciosissima (New South Wales waratah): 122667547
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Entry
122667547 CDS
T07910
Name
(RefSeq) small RNA degrading nuclease 5-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122667547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tss03009
]
122667547
Ribosome biogenesis [BR:
tss03009
]
Eukaryotic type
Pre-60S particles
RNases
122667547
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Ferritin
Motif
Other DBs
NCBI-GeneID:
122667547
NCBI-ProteinID:
XP_043719792
LinkDB
All DBs
Position
7:1470114..1510590
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AA seq
559 aa
AA seq
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MASACLKREEQTTNDDNDIIIRKSNGTTTYFDVYGPQGKADVVFKTPTADSLLNLQDIQG
LVTWVLGEGFMPSWVFIKNKPLIPKVVLLYVPGLDAAFYMSQSSLLLGLKENCGNPREVL
ALSCVSDGMQTIDALLTCKLKRKREEISAVSKCPEQVSKEHMKPFPVSYYTLTAKELEDN
GYYLTQPDFISTLPSPSGSPPCEMLALDCEMCVTINGFELTRLTLVDVDGQVMLDKLVKP
SNAILDYNTRYSGITSEMLSGVTTTLKDIQEEFLKLVYMETILIGHSLENDLLALKISHD
LVIDTAILYKNPRGVRYKTALRVLAQRFLSREIQASGNGHDSIEDARAAMELALLKIRHG
PEFGSLPSFMRKKLVSILSESGKTCSFIDDVSIVKRYAAGSCHAFPVSSDEEALSKARKE
VKNDNVHFVWTQFSELNSYFRRQAEDVEKLNEKVAEMISLLTCHKTSTRSKGIKYTVTPE
LEDILTRMDARIQSVYAMLPTNAMLIVCTGHGDTAMVQRLRRMISEQEETTICREKLVGV
LEEVQAQAELALCFVGVKH
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcgtgcctcaagcgcgaagagcagacaaccaacgatgacaacgatattatt
attagaaagagcaatggcaccacaacttacttcgatgtgtacggacctcaagggaaggca
gatgttgtttttaaaactcctacagctgactcattattgaatctacaagacattcaggga
cttgtcacctgggtgcttggtgaaggatttatgccatcttgggtctttatcaaaaacaag
cctctgattccgaaagtggtcctgctttatgttccaggccttgacgctgcgttttacatg
tcccagtccagcctacttcttggccttaaagaaaattgtggcaatccaagggaagtttta
gctcttagctgtgtatcagatggaatgcagacaatagatgcgcttctaacttgcaaactg
aaaagaaagcgggaggagatcagtgcagtttccaagtgtcctgaacaagtaagtaaggaa
catatgaagccatttccagtttcttattacacacttacagcaaaagagctagaagataat
gggtactatctaactcaaccagattttatctccactcttccttctccttcaggatctccc
ccttgtgaaatgctggcacttgactgtgagatgtgtgtcacaatcaatgggtttgaactc
acaaggctgacgctagtagatgttgatggacaggttatgttagacaaattggttaaacct
tccaatgctattcttgactacaatactaggtatagtggaatcacaagtgagatgctgagt
ggggtgactacaactcttaaagatattcaggaagagtttctaaagcttgtttacatggag
accatcctaattgggcactctttggagaatgacctattagccttaaagatctcccatgat
ttggtgattgatactgcgatattgtataaaaaccctcgtggtgtacgctacaagactgct
ttaagagtgcttgcccaaagatttctttctagggagatacaagcatcaggaaatgggcat
gacagtattgaagatgcaagagcagcaatggaattagcactgttgaagattagacatgga
cctgaatttggttcactgccatcattcatgcggaagaaactggttagtattttgagtgag
agtggcaagacttgctcttttattgatgatgtttccatagtgaagcggtatgctgcagga
tcttgccatgcatttcctgtatcttcagatgaggaagcactttcaaaggccagaaaggag
gtgaagaatgataatgtacactttgtctggacccaattctcggagttgaattcctatttt
cggcgacaggcagaggatgtggagaagttgaatgagaaagttgcagagatgatttcattg
cttacgtgtcataagacatctacaagaagtaaaggcatcaaatacactgtgacccctgaa
ttggaggacatactaactcgtatggatgctcgaatccaaagcgtctatgccatgttacca
acaaatgccatgcttattgtttgcactggtcatggagacacagcaatggtccaaaggtta
aggagaatgatttcagagcaggaagagaccacaatttgccgtgagaaacttgtgggggta
ttggaagaggtccaggcccaagctgaactggctctatgttttgttggtgtgaagcattga
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