Telopea speciosissima (New South Wales waratah): 122667592
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Entry
122667592 CDS
T07910
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03030
DNA replication
tss03410
Base excision repair
tss03420
Nucleotide excision repair
tss03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122667592
03410 Base excision repair
122667592
03420 Nucleotide excision repair
122667592
03430 Mismatch repair
122667592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tss03032
]
122667592
03036 Chromosome and associated proteins [BR:
tss03036
]
122667592
03400 DNA repair and recombination proteins [BR:
tss03400
]
122667592
DNA replication proteins [BR:
tss03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122667592
DNA Replication Termination Factors
ELG1-RFC complex
122667592
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122667592
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122667592
Check point factors
HRAD17(Rad24)-RFC complex
122667592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_22
AAA_16
AAA_assoc_2
AAA_11
AAA_5
AAA_14
DUF815
DNAX_ATPase_lid
AAA_24
AAA_30
RuvB_N
AAA_7
AAA_3
ATPase_2
bpMoxR
ResIII
AAA_19
nSTAND3
AAA_2
TniB
TIP49
ABC_tran
AAA_28
Mg_chelatase
AAA_25
Motif
Other DBs
NCBI-GeneID:
122667592
NCBI-ProteinID:
XP_043719862
LinkDB
All DBs
Position
7:9347229..9375309
Genome browser
AA seq
357 aa
AA seq
DB search
MAETISPMEIDDADRPPKPNKGKNVVTVSSYGKATPWVEKYRPQSLADVAAHRDIVDTID
RLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQ
DFASTQSFSFSGKSSVKLVLLDEADAMTKDAQFALRRVIEKYTRNTRFSLICNHVNKIIP
ALQSRCTRFRFAPLDASHVRERLKYVIEAEGLDVAESGLAALVRLSNGDMRKALNILQST
HMASQHITEEAVYLCTGNPMPKDIEQICYWLLNESFTTSFNLISEIKTRKGLALVDIVRE
VTTFIFRIKMPSDVRVHLINDLADIEYRLSFGCNDKLQLGSLIASCTHTRSSMVAAA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacgatttcacccatggaaatcgatgatgctgatcggccaccaaagcccaac
aagggcaagaacgtggtcaccgtctcatcgtacggcaaagccacaccgtgggtggagaag
taccgccctcaatccctagcagacgttgccgctcaccgagatatcgttgacacgatcgat
aggcttacgaacgagaacagattgccgcatctcctcctttacggtcctcctggaaccggc
aagacgtcgacgattcttgccgttgctcggaagctttatggagcccagttccacaatatg
atcttagagctgaatgcgtccgatgacaggggtatcgacgtcgtgagacagcagattcaa
gacttcgccagtactcagagcttctcctttagtggaaagtcatctgtgaagttggttcta
ctggatgaggcagatgccatgacaaaggatgcacaatttgccttgcgtagagtgattgag
aaatacacaaggaacaccagattttcccttatctgtaatcatgtcaacaaaattattcca
gcattacaatccaggtgcacccgatttcgatttgctcctctcgatgcttcgcatgtcagg
gaacgtcttaaatatgtaatagaagctgaagggcttgatgtagctgagagtggcttagct
gcccttgtacggttgagcaatggtgacatgagaaaagctttgaacattttgcagtcaaca
catatggcttctcagcatataacggaagaagcggtttacctgtgcactggaaatccgatg
ccgaaagacattgaacagatatgctattggcttctaaacgaatcatttacaactagtttt
aatctgatatccgaaatcaagacgagaaaagggttggccttggttgacattgtgagagag
gtcactacgttcattttcagaatcaaaatgccatcagatgtccgagtccatttgattaat
gatttggctgatattgagtacaggttgagttttgggtgcaatgacaagttgcaacttgga
tcacttatcgcttcttgtacacacactcgatcttctatggttgccgcagcataa
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integrated database retrieval system
