Telopea speciosissima (New South Wales waratah): 122667751
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Entry
122667751 CDS
T07910
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00040
Pentose and glucuronate interconversions
tss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122667751
Enzymes [BR:
tss01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122667751
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
122667751
NCBI-ProteinID:
XP_043720094
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Position
7:23094020..23098636
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AA seq
440 aa
AA seq
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MAVSLRWFSLCFVLLLLFVAVMARVGEAVSEARIKEAEELLRSKNSSIAGRLGVGNEHAV
ENPEEVASMVEMSIRNSTERRKLGYLSCGTGNPIDDCWRCDPNWQINRKRLADCGIGFGR
NAIGGRDGRLYVVTDPGDDDPVNPRPGTLRHAVIQDMPLWIVFQRDMVITLKEELIMNSF
KTIDGRGSNVHIANGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSPSHFGWRTMADGD
AISIFGSSHIWVDHNSLSHCADGLVDAVMGSTAITISNNHFAHHNEVMLLGHSDSYTKDK
EMQVTIAYNHFGAGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYLAP
TDPFAKEVTKRVETAPGVWKGWNWRSEGDMMLNGAYFTPSGAGASASYARASSLGAKSSS
MVASMTSGAGVLSCRKGGQC
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttctctgaggtggttttctctgtgttttgtgctgctgttgttgtttgtcgct
gtaatggctagagtaggagaggcggtttctgaagcgaggattaaagaagcagaggagttg
ctgagatcaaagaactcatcaatcgccggaaggttgggtgtgggtaatgaacatgccgtt
gagaatccggaggaagtcgcttccatggtggagatgagcatacgcaacagcaccgaaagg
aggaagttgggctacctgtcctgtggcacaggaaatcccattgatgactgttggcgctgt
gacccaaactggcaaatcaaccgcaagcgcctcgctgactgcggcattggctttgggcgc
aatgccatcggtggtcgcgatggccgcctctacgtggtcaccgaccctggtgatgatgat
ccagtcaaccctcgacctggcaccctccggcatgcagtcatccaggatatgcctctgtgg
atcgtgttccagcgcgacatggttatcactctcaaggaggagctcatcatgaacagcttc
aagaccattgacggccgtggttccaatgtccacattgctaatggagcttgcatcaccatc
cagtttgtcaccaacatcatcatccatggactacatatccacgactgcaagcccactgga
aatgccatggtccggagttccccatctcactttggatggaggactatggccgacggtgat
gccatctccatctttggatctagccatatctgggtcgatcataactctctctcccactgc
gctgatggccttgtggatgctgtcatgggctcgactgccatcaccatttctaacaaccac
ttcgcccaccataatgaggtaatgttgttgggtcatagtgattcctacacaaaagacaag
gagatgcaagtgaccatcgcttacaaccatttcggagcaggtctcattcagaggatgcca
aggtgtaggcatgggtatttccatgtggtgaacaacgactatactcattgggaaatgtat
gcaattgggggaagtgcaaacccaaccatcaacagtcagggaaacagataccttgcccca
acggaccctttcgccaaggaggtgacaaagcgggtggaaacagctccaggtgtgtggaag
ggctggaactggaggtcagagggagacatgatgttgaacggagcctacttcactccatct
ggagctggggcttcagccagctatgcaagggcctcaagccttggagccaagtcctcttcc
atggtggcctcgatgacatcaggtgctggcgttctcagctgccgcaagggcgggcagtgc
tag
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