Telopea speciosissima (New South Wales waratah): 122667805
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Entry
122667805 CDS
T07910
Name
(RefSeq) nuclear pore complex protein NUP96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122667805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122667805
03036 Chromosome and associated proteins [BR:
tss03036
]
122667805
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122667805
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122667805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
ARM_FBXO47
Motif
Other DBs
NCBI-GeneID:
122667805
NCBI-ProteinID:
XP_043720177
LinkDB
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Position
1:complement(7166959..7182753)
Genome browser
AA seq
1065 aa
AA seq
DB search
MASTSSAHAPGIYDELCGVRNSVSFETYYCSKFDSGTLSLYLPSQCKKGKISVDMYNPSC
WALSDIKASFPVLHSSDYFMEPSLLDLDAQELNDPGHCCRVRNFTVGRVGYGWVKFLGET
DVRWLELDQIVKFDRHEVVVYEDETDKPAIGEGLNKAAEVTLVLQIKPLSDERVKLDSIA
EKLKIITEKQGACFISFDPLNGEWKFLVRHFSRFGLSEDDEDDIIMDEATAAQHPEEVDG
GEPCEVDEEPQIGPDGAVLSHSLPAHLGLDPIKMQEMRMVMFPVEEGETEDFDGLFSREK
QSFSREYGRPSLQYSSRKMSHRVSPPIVRKTPQSLLEYNIKGSDQPGTILMARQNLGIAP
RTTKVRGFQLDLKHETPVTGHHSRYVVDAGLFMGRSFRVGWGPNGVLVHCGSPVGSTGPG
VLSSIVNVEKVAINKVVRDENNKVKEELIDCCFASPLSLHKSISHETMEVEVGSFRLKLQ
KVVSNRLVLPEICRSYIDIIEKQLDVPCLSASARGVLMHQVMVWELIKVLFSVREVSGHS
TPVDVDDEEDMLGDKKDGSPDIDPEALPFVRRAQFSYWLQESVCHRVQEEISCLNESRDL
EHIFLLLTGRQLDVAVELSASRGDVRLACLLSQAGGSTVNRSDMARQLDLWRTNGLDFNF
IEKDRLRLYELLAGNIQGALQDSVIDWKRYLGLLMWYQLPPDTSLAGIIHTYQQLLDAGK
APYPIPVYIDEGLVEEAVNWSVGDRFDLAYYLMLLHASEESEFGLLKTMFSAFSSTCDAL
DYHMLWHQRSVLEAVGAFCSNDLHVLDMSFVSQLLCLGQCHWAIYVVLHMPYRDDFPYLQ
ATLIREILFQYCESWSSQEIQHRFIKDLGVPSAWLHEAMAVYFHYQGDLLKALEHFLECS
NWQKAHSIFVTSVAHSLFLSAKHSEICRLAVSMEEHKSEIADWDLGAGIYISFYIIKNTI
RDGAMYDLESLERNKASCREFFGRLNESLAVWGSRLPADARATYSEMAEELCAILILDGG
EASTYEDQLSCFETMFNAPIPEDLREGHLQDAVSVFTCYLTEMAS
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctacttcttctgctcatgcacctgggatttatgatgaactttgtggtgttaga
aacagcgtttcctttgaaacttactattgtagtaaatttgattctggaactttgagcttg
taccttccatctcaatgcaagaaaggaaagatttctgttgacatgtacaatccttcatgt
tgggctctcagcgacatcaaagcttcctttcctgttttgcattcatctgattattttatg
gaaccttccctattggacttggatgctcaagaactcaatgatcctggccactgctgtcgt
gttcggaatttcacggttggaagggttggatatggatgggttaagtttcttggtgaaact
gatgtcagatggttggaattagatcaaattgtcaagtttgataggcatgaggttgtagta
tatgaggatgaaactgacaagcctgctatcggtgagggtcttaataaagctgctgaagta
actttggtgcttcaaataaaaccattgtctgatgagagggttaaactggatagcattgct
gagaaacttaagatcatcacagaaaagcagggagcatgcttcatttcctttgacccattg
aatggtgaatggaaattcttggttcgccattttagcagatttggattaagtgaagatgat
gaagatgatatcatcatggatgaagctactgcagctcaacatccagaggaggtggatggt
ggtgagccatgtgaagttgatgaagaacctcaaattggtcccgatggagctgttctatcc
cattccctgcctgctcatcttgggcttgatcccatcaagatgcaagaaatgagaatggta
atgtttcctgttgaggagggggaaactgaagattttgatggactattttcgcgtgagaaa
cagagttttagtagagagtatggaagacctagtttacagtattcatccaggaagatgagc
catagagttagtcctcccattgtgcggaaaaccccacaatctttacttgagtacaatata
aaaggttcagaccaaccagggaccattctgatggctcgtcaaaatctgggcattgcacca
aggacaacaaaagttagaggcttccaattggatcttaaacatgaaactccagtaactgga
caccattctagatatgtagttgatgcaggattgttcatgggaaggtcatttcgggttggt
tggggtccaaatggtgtccttgtccactgtggctcacctgttggtagcactggtcctggt
gtattatcgtctattgtcaatgtagaaaaggttgcaattaacaaggtggttagggatgaa
aacaacaaagtgaaagaggagcttattgattgctgttttgcctcaccattgagtctccac
aagtcaataagtcatgaaacaatggaagttgaagttgggtcgttcagactaaagcttcaa
aaggttgtatctaatcgcctagtgcttcctgagatctgccggagttatatagatattatt
gagaagcagcttgatgttccttgcttatctgcttctgcccgtggggttctgatgcaccaa
gttatggtctgggaattgataaaggttctcttttctgtcagggaggtcagtggacattca
acacctgtagatgttgatgatgaggaggatatgctgggtgataagaaggatggttctcca
gacattgatccagaagcactcccttttgttcgcagagcacagttcagttattggttgcaa
gaaagtgtttgccaccgagtacaagaagaaataagctgtttaaatgagtcccgtgattta
gagcacatcttcttacttctgactgggcggcagcttgatgtcgcagttgaattgtctgct
tccagaggagatgtaagactagcttgtttgctgagtcaggctggtgggtcaactgtgaat
cgatctgatatggctcggcagcttgacctttggagaaccaatgggctggacttcaacttt
attgagaaggacaggttgaggttgtatgagttacttgctggtaatattcaaggtgctttg
caagattcagtaattgattggaaaagatatctagggttgttgatgtggtatcagctacct
cctgatacttctttagccggcatcattcacacatatcagcagctccttgatgctggaaag
gctccatatcctattccagtttacattgatgagggactggttgaggaggctgtgaactgg
agtgttggggaccgctttgacttagcctattatcttatgctccttcatgcgagtgaagag
agtgagtttgggctcttgaagactatgtttagtgctttttcttcaacctgtgatgcactt
gactaccatatgctttggcatcaacgtagtgtactggaagctgttggtgctttctgttct
aatgatctccatgttcttgacatgagttttgtttctcaactgttgtgtcttgggcaatgt
cattgggccatctatgttgtcctccatatgccttaccgtgacgatttcccatatctccag
gccactcttattagggaaattttgttccaatattgcgaatcctggagttcacaagaaata
cagcaccgattcattaaagacttgggtgttccatcagcatggctgcatgaggctatggcg
gtatatttccattaccaaggtgatctactaaaggcccttgaacattttcttgaatgctcc
aattggcaaaaagctcattcaatttttgtgacttccgttgctcattcattgttcttgtct
gctaaacattcggagatctgtagacttgcagtttccatggaagaacacaaatcggagatt
gcagattgggacttgggtgctgggatttatatttctttttacattataaaaaatactata
cgagatggtgccatgtatgacttggagtctcttgagagaaacaaagcttcttgtagagag
ttctttggccgcttaaatgagtcgttggcagtatggggaagcagattgccagccgatgcg
agagcgacatattctgagatggctgaggaattatgtgctattcttatattggatggtgga
gaggcctcaacctatgaagatcagttgagctgctttgaaaccatgttcaatgcccctatc
ccagaagacctgcgcgaaggtcatcttcaagatgcagtatcggtcttcacttgttatctt
actgaaatggcttcatag
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