Telopea speciosissima (New South Wales waratah): 122667865
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Entry
122667865 CDS
T07910
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122667865
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122667865
Factors involved in mRNA localization
Other mRNA localization factors
122667865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
122667865
NCBI-ProteinID:
XP_043720248
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All DBs
Position
7:complement(23521411..23642382)
Genome browser
AA seq
1201 aa
AA seq
DB search
MKMIMQLPDSMKQSQAELYMETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERR
INGPTITHLWSMLRLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSVQWQDTDSMREEL
DDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIVFCVESLELDFALLFPERQILLRVL
PVLVVLATTSDKDGESLYKRVKINRLINIFKNDPVIPAFPDLHLSPSAMLKELSMYFQKF
SSQTRLLTLPAPHELPARETQDYQRHYFIVNHIGAIRAEHDDFAVRFASSMNQIISLKST
DGADVEWCKEVKGNMYDMVVEGIQLLSKWSGRIWEQCAWKFSRPCKDAIPAETHESSASF
SDYEKVVRWNYTMEERKALVELVGYIKGIGSMMQRCDTLVADALWETIHAEVQDFVQNKL
ATMLRTTFRRKKDLSRILSDMRTLSADWMANTSKPGSELQSLQHGGEENKGNLFYPRPVA
PTAAQVHCLQFLIYELVSGGNLRKPGGLFGNTGSEIQVNDLKQLETFFYKLGFFLHILDY
TVTIATLTDLGFLWFREFYLESSRVIQFPIECSLPWMLVASVIESQDAGLLESILMPFDI
YNDSAQHALVVLKQRFLYDEIEAEVDLCFDQLVVKLSETVFTYYKSWAASELLDPSFIFA
LDNGEKYSIQPIRFNALLKMTRVKLLGRTIDLRSLIAERMNKLFRENLEFLFDRFESQDL
CAIVELEKLVDILKHSHELLSRDLSMDSFSLILNEMQENISLVSFSSRLASQVWAEMQND
FLPNYILCNTTQRFVRSSKASLVPVQKPSVPYAKPNFYCGSQDLNMAHQSFARLHSGFFG
IPHMFSIVRLLGPRSLPWLIRALLDYISNKITTLEPMISGLQEALPKSIGLLPFDGGVAG
CQRMVKEQLNWGSKSELKAEVLRGIKEIGSVIYWMGLLDIVLREVDTTHFMQIAPWLGLI
PGADGQIFHSQDGDSPIVSLFKSATAAITSDPKCSNRASFYTISKQAEAADMLYRANMNT
GSVLEYTLAFTSAALDKYCSKWSATPKTGFIDITTSKDFYRVFSGLQFGYLEESVHTPSH
SHEVLGDSVAWGGCTIIYLLGQQLHFELFDFSYQLLNVAEVETASIAQSIKYANNVQGWE
NLLEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQSGAPLHRIKFENTVSAFETLPQKG
A
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgattatgcagcttcctgattcgatgaagcaaagtcaggcagaactgtacatg
gagacctatcaagttcttgatttggagatgagtcgtctgcgtgaaattcagagatggcaa
gcatcagctgcttctaaactggcagctgatatgcaacgattttcaaggcctgagaggcgc
ataaatggtcctaccataactcatctttggtccatgttgaggttgcttgatgttttggta
caacttgatcatcttaagaatgcaaaagcaagcatacccaatgatttttcttggtataag
aggacttttactcaagtcagtgttcagtggcaagatactgattcaatgagggaggagtta
gatgatttacagattttcttaagcaccagatgggctattttattgaacttgcatgttgag
atgttccgtgtgaataatgtagaagacattcttcaagtccttatagtattttgtgttgaa
tctctggagttggattttgcacttctgtttccagaacgccaaattctcctacgtgtcttg
cctgttcttgtcgttctagcaacaacatcagataaagatggtgaatcattgtacaaaagg
gtgaaaatcaatcgactcattaacatattcaagaatgatcctgttattcctgcattccca
gatcttcatctttctccttcagcaatgttgaaagagctgtcgatgtacttccaaaaattc
tcaagccaaactcgtcttcttactctcccagcaccacatgaactcccagctcgtgagaca
caagattatcagaggcattattttattgtcaatcacattggagctatacgtgccgagcat
gatgattttgctgttcgttttgcttcatccatgaaccagattatatcactgaaatcaaca
gatggtgcagacgttgagtggtgcaaggaagtgaagggaaatatgtatgatatggttgtt
gaaggtattcagcttctaagcaaatggagtggacgcatttgggaacagtgtgcatggaaa
ttctctcgtccctgtaaagatgcaattcctgcagaaactcacgagagttctgcatcattt
tctgactatgagaaggtggttcggtggaattataccatggaggaaaggaaggcactggta
gagcttgttggttacataaagggtattggttcaatgatgcagcggtgtgacacgttagtt
gctgatgctctgtgggaaacaatccatgctgaggtccaagactttgtgcagaacaaatta
gccaccatgctgcgaactacatttcgcaggaagaaggatttgtctaggattctttctgat
atgcggacactttcggcggactggatggcaaatacaagcaagcctgggtcagagttgcaa
tctttacaacatggaggtgaagaaaacaaagggaatttattttatccaaggccagttgct
ccaacagctgctcaggttcattgcctgcagttcctgatatatgagcttgtatccggtggt
aatttgagaaagccaggagggctttttggaaatactggctcagagattcaagttaatgat
ctgaaacagttggaaactttcttttacaagcttggcttttttctccatatcttggattat
acagtgaccattgcaacattaactgatcttggtttcctctggtttagagaattttatttg
gagtcttctcgtgttatccagtttcccatagaatgctctcttccatggatgctggtggct
tctgtgatcgagtcccaggatgcaggtctacttgagagcattctgatgccatttgacatc
tataatgattctgcccaacatgcattggttgtgctgaagcagcgtttcctgtatgatgaa
attgaagccgaggtggatctttgttttgatcaactggttgtaaagttgagtgagactgtt
ttcacatattataaaagctgggcagcaagtgagctacttgatccttctttcatctttgcc
ttggacaatggagaaaaatattctattcaaccaattcgattcaatgcactgctaaagatg
accagggtaaagctcttgggaaggaccattgacttaaggagcttaattgctgaacggatg
aacaaattattcagggagaaccttgagtttctgtttgaccgttttgagtctcaggatctg
tgtgctattgtggaattagagaagctcgttgatatcttaaaacattcccatgaattgctt
tcgagagatctttcaatggactcattcagtctcattttgaatgagatgcaagagaacata
tctcttgtttccttttctagtcgacttgcttcccaggtgtgggcagagatgcagaacgat
ttcttgcccaattatatcctttgtaatactactcaacgttttgttagatcatctaaagca
tcgcttgttccagttcaaaagccatcagttccctatgccaaacctaacttctattgtggt
tctcaagatctaaatatggctcatcagagttttgcacgattgcacagtggattctttgga
atacctcatatgttctccattgtcagactattaggacctaggtcattgccatggcttatt
cgagctcttctggattatatatcaaacaagataacaacgcttgaaccaatgattagtgga
ttacaagaagcattgccaaaatctattggattgcttccctttgatggaggtgttgcaggt
tgtcagaggatggttaaagaacagcttaactggggatcaaaatccgagcttaaggcagaa
gttcttcgtggcataaaggaaattggaagtgtaatatattggatggggcttcttgatatt
gtattgagagaagtcgatactacacatttcatgcagatagctccatggttgggtttgatt
cctggagccgatgggcaaatattccattctcaagatggagacagccctattgtctcccta
ttcaaatctgcaactgctgcaatcacatcagaccctaaatgctcaaatcgagcatccttc
tataccatatcaaaacaggcagaagctgcagatatgttatacagggcaaacatgaataca
gggagtgtcctggaatacacccttgcttttactagtgctgcattggacaaatattgcagt
aaatggagtgcaactcccaagactgggttcattgacattacaacttcaaaggacttctat
cgtgtattcagtggccttcaatttggatatttagaggagtctgttcacacaccatcacac
agtcatgaagttttgggtgattcagtggcttggggtggttgcactatcatatatttgctt
ggtcaacagctgcactttgagctcttcgatttttcatatcagctcctcaatgttgcagaa
gtggagactgcatcaattgcgcaatcaattaaatatgctaataacgtgcaggggtgggaa
aacctgttagaagctatgaagaaagcaaggagattgaacaatcatgtgttctcaatgctg
aaagcacgttgcccacttgaagacaagacagcatgtgcaataaagcaaagcggtgcccct
ctccatcgaatcaaatttgagaacactgtatcagcgtttgaaacattgcctcagaaaggt
gcctga
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