Telopea speciosissima (New South Wales waratah): 122667928
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Entry
122667928 CDS
T07910
Name
(RefSeq) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122667928
03036 Chromosome and associated proteins [BR:
tss03036
]
122667928
Transcription machinery [BR:
tss03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122667928
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
122667928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HHH_9
Spt6_S1
HTH_44
Tex_central_region
HHH_3
Tex_N
Motif
Other DBs
NCBI-GeneID:
122667928
NCBI-ProteinID:
XP_043720348
LinkDB
All DBs
Position
7:20979721..21019733
Genome browser
AA seq
1667 aa
AA seq
DB search
MGGRAVVSDDEDDVAEEEEREVEDVDAEVDGDADEADVEERNEEEDDEEEDEEGQDEYEK
DGFIVDDVDEEEDQEEEEEEREDSDKERQKKKKRKKRESEKNYVLDEDDYELLQDNNAPG
FQRLKPGSKKFKRLKKAGRDSEREEPFGFSDEEAFDETGRSGRTAEEKLKRSLFGDDEGA
PLEDIAEEEEQPEEEDDGDMGDEDEMADFIVHEEEEFDENGAPVRRKKPKRKKLRQAPGV
SSAALQEAHDIFGDVEDLLDRRKRSLEKGVRLDEDGEWKEKRLEDEFEPFVLTEKYMTEK
DNQIREIDVPERIQLYEESTGPPPTDMLSIEEESSWIYNQLYSSDEDGLDVSKRVRKEDI
VSFLDMLHDKKYDIPFIAMYRKEACPTLLRGQVQDEAEGDEGDNAEKKPRIKWHKVLWLI
KDLDRKWLLLQKRKSALQLYYNKRYEEETRRIYDETRLSLNQQLFESITNYLKTAESERE
VDDVDLKFNLHFPPGEVGVEEGQFKRPKRKSLYSVCSKAGLWEVASKFGDNSEEFGLHFN
LEKMRDINEEVAKDSPEEIASNFTCAMFETPQAVLKGARHMAAVEISCEPCVRKHVRSSY
YMGKAVVSTSPTPDGNVAVDPFHQYAGVKWLHEKPLVKFEDAQWLLIQKAEEEKLLIVTI
KLPAKELNKLLREANEAYLSDGVSKSAQIWNEQRKLILQDAFFNFLLPSMEKEARSLLTA
RAKNWLLMEYGKNLWNKVSVAPYQRKESDIASDDEAAPRVMACCWGPGKPSTTFVMLDSS
GEVLDMLYTGSLSIKSQNANDQQRKKNDQQRVLKFMTDHQPQVVVLGAVNLSCTRLKDDI
YEIIFKMVEEYPRDVGQEMDNLVVVYGDESLPRLYENSRVSSDQLPGQPGIVKRAAALGR
YLQNPLAMVATLCGPAREILSWKLSPLEHFLTPDEKYEMVEQVMVDATNQVGIDINLAVS
HEWLFAPLQFVAGFGPRKAASLQRALVRAGAIFSRKELTISGLKKKVFINAVGFLRVHRT
GLASNSSHIMHLLDDTRIHPESYEIATEMAKEVYKHEVEVDDESNDLDEDVQEMAIEHVR
ENPKMLKTLDLEEYASSKECTHKLQTLNDIKMELLHGFQDWRIPYQEPSQDEEFYIISGE
TEETLAEGRLVQATVRRVQPQRAFCVLESGLSGILFKEDFSDDPIVNLTEHLNEGEILTC
KIRSIQKHKYQVFLTCKERELKSNSYQNSRSRDSYYREDPSSLQSEQEKARKEELAKKHF
KPRMIVHPRFQNITADEAMEFLFDKDVGEAIIRPSSRGPSFLTLTLKIYDGVYAHKDIVE
GGKEHKDITSLLRLGKTLKIGHDTFEDLDEVMDRYVDPLVTHLKAMLSYRKFKKGSKAEI
DDLLRIEKSEHPMRIVYCFGICQEHPGTFILSYIRSTNPHHEYIGLYPKGFRFRQKDFED
IDRLVAYFQRHIDDPPPGSTPSIRSVAAMVPMKSPATGGSSGGVSVGSGWGGSAASNDGG
WRGHSNSDRERSSTPGSRTGRNDYRNGGGRHGHPSGVPRPYGGRGRGHGSYNGRGNDSSS
ERLDSGYGSSRWSSGSKDGDDGWNNFPGAKVQNSPGREAFPGGWGGWAGGSGGGGGASAD
GDGTVDPGPDARNSGWGDGSKKSNLAQTAANGWSGSSSGGWTGGGGW
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atggggggaagagctgtagtatctgatgatgaagatgatgttgcagaggaagaagagagg
gaagttgaagatgttgatgcagaagttgatggcgatgctgatgaagcagacgttgaagag
aggaacgaagaagaagatgacgaagaagaagatgaagaggggcaggatgaatatgagaag
gatgggtttatagtagatgatgtggatgaagaagaagatcaggaagaggaagaagaagaa
agggaagacagtgataaagagaggcaaaagaagaagaagaggaaaaagagagaatcagag
aagaattatgttcttgatgaagatgactatgaattgcttcaggataacaatgctccgggt
ttccaacgcctgaaacctggtagcaaaaaatttaagcgtttaaaaaaggctggtagagac
agtgaacgggaagagccatttggattttctgatgaggaagcatttgatgaaactggtcgg
agtgggcgaactgcagaggaaaagcttaagcgcagcttatttggggatgatgaaggagca
cctcttgaggatatcgctgaagaggaagaacaaccggaggaagaagatgatggggatatg
ggtgatgaggatgaaatggcagattttattgtgcatgaagaagaagaatttgatgaaaat
ggagctcctgtgagacgtaagaagccaaaaagaaagaagttgaggcaggctcctggagtt
tcatcagctgcactgcaggaagctcatgatatatttggtgatgttgaagacctcttggat
cgtcgcaagagaagccttgagaagggtgttaggttagatgaagatggtgaatggaaggaa
aaacggttggaggatgaatttgaaccattcgtccttacagagaagtacatgactgagaag
gataatcagataagagagattgatgtgccagagagaatacagttatatgaggaaagcact
gggccacctccaactgatatgctgagtatcgaagaagagagcagttggatatacaaccag
ctttatagcagtgacgaggatggccttgatgtatcaaaaagagtaagaaaggaagacatt
gtaagcttcttggatatgctgcatgataagaagtatgatattccttttattgctatgtat
cggaaagaggcttgtccaactctgttgagaggacaagtgcaagacgaggcagaaggtgat
gaaggcgataatgctgagaagaaacctagaataaagtggcacaaggtcctatggctcatc
aaggatttggacaggaaatggctgcttcttcagaagcggaagagtgctcttcagttgtat
tataataagcgctatgaagaggagactcgtaggatatatgatgaaacaaggctgtcttta
aatcagcagctctttgagtcgattaccaattatctcaagactgctgaatcagaaagagag
gttgatgatgttgacttaaaatttaatctgcatttccctccgggtgaagtgggagtagaa
gaaggacaatttaaaaggccaaagagaaaatccctatatagtgtatgtagtaaggctggt
ctttgggaggttgccagcaagttcggtgacaactctgaagagtttggattgcattttaat
ttagaaaagatgagagacataaacgaggaggttgcgaaagactctccagaggaaatagct
tccaatttcacatgtgcaatgtttgagactcctcaggctgtgcttaaaggtgccaggcac
atggcagcagtcgagatctcctgtgaaccatgtgtcaggaaacacgttcgtagttcttat
tatatggggaaagctgttgtctccacaagtcctacacctgatggtaatgtggccgtagat
ccttttcatcaatatgctggagtaaagtggttacacgagaagccactggtgaaatttgag
gatgcccagtggcttttaatccagaaggctgaagaagaaaaactcctcatagtaactatt
aaattgccagcaaaagagctaaacaagttactaagagaggctaatgaagcttatctcagt
gatggtgttagtaaatctgcccaaatttggaatgagcagcgcaagttgatcttgcaagat
gcgttcttcaattttcttcttccttccatggagaaggaagctcgttcactgttgactgca
agagcaaaaaattggctgcttatggaatatgggaaaaacttgtggaacaaggtgtctgtt
gcaccatatcagcgtaaggaaagtgatattgcttctgatgatgaagctgcaccaagggtc
atggcttgctgttggggtcctgggaagccatcgactacctttgtgatgttggattcatcg
ggtgaagttctggatatgttgtatacagggtctctcagcattaagtctcagaatgctaat
gatcagcaacggaagaaaaatgaccaacaacgtgtcctgaagttcatgaccgaccaccaa
ccacaggtggtggttctaggagctgtgaatttgtcctgcacgcggctgaaggatgatatt
tatgagattatcttcaagatggtggaggaatatcccagagatgttggtcaagaaatggac
aatttagttgttgtttatggggacgaatctcttcctcgtctttatgaaaattcacgggtt
tcttcggatcagctacctggtcaacctggcattgttaaacgtgctgcagctcttgggcgt
tatctccaaaatcctttggccatggttgctactctatgtggaccagcaagggagatttta
tcgtggaagctcagccctttagagcacttcttgactcctgatgagaagtatgagatggtt
gaacaggttatggttgatgccaccaaccaggtaggcattgacatcaatttagctgttagc
catgagtggctctttgctcctttgcaatttgttgcagggtttggacctagaaaagcagct
tcattacagagggcattagtaagagctggtgcaattttcagtcgaaaagagttgacaatt
agtggacttaaaaagaaggtattcatcaatgctgttgggtttttacgtgtgcatcggact
gggcttgcaagtaatagcagccacattatgcatctgttggatgatacgagaattcatccg
gagtcctatgaaattgcaacagaaatggcaaaggaggtttataaacatgaggtggaagta
gatgatgaatcaaatgatttggatgaggatgtgcaggaaatggcgatagagcatgttaga
gagaacccaaagatgttaaaaacccttgatcttgaggaatatgcgtcatccaaggagtgc
actcataagctacaaactcttaatgatataaagatggaactgttgcatgggtttcaagac
tggcgcattccctaccaagaacctagtcaggatgaggaattctatattatttctggtgaa
actgaggaaacccttgctgagggccgccttgtgcaggcaacggttcgcagggtacaaccc
caacgagcattctgtgtgcttgaatctgggttgagtgggattcttttcaaggaggacttt
tcagatgatccaattgttaatctaactgagcatctgaatgagggggaaatactcacttgc
aagattagaagcattcaaaagcataaataccaggtgtttctgacttgtaaagagagggag
ttaaaaagtaattcctatcaaaattctcgtagtcgtgattcctactaccgggaagaccca
agcagtttacagagtgagcaggagaaagctcgtaaggaggagttagcaaagaagcatttc
aagccaagaatgattgttcatccccgtttccagaatattactgctgatgaggcaatggag
tttctttttgacaaggatgttggtgaagctattatccgtcccagttctagagggccgtct
tttctgactttaacgttgaagatttatgatggagtttatgctcataaagatatagttgaa
ggtggaaaagaacacaaggatatcacaagcttgcttcgtcttggaaaaaccttaaaaata
ggtcatgacacttttgaggatttagatgaggttatggatcgttatgttgatccactggta
acacacttgaaggctatgctcagttaccgcaaattcaagaaggggtcgaaggcagaaatt
gatgatctcttaagaattgagaaatcagaacatccaatgaggattgtttactgttttggc
atttgtcaagagcatccgggaacttttattttgtcctatatacgcagcacaaatcctcat
cacgagtacattgggctgtatcccaagggattcaggtttcgacaaaaagattttgaggac
atagatcgccttgtggcatatttccaaagacacattgatgatcctcctccgggttcaacg
ccatcaattcgatcagttgccgctatggtaccaatgaagagccctgcaactggaggttcc
tcaggaggggtatctgttggcagtggatgggggggttcggcagctagcaatgacggtggt
tggagaggtcattcaaattcagacagagagagatcttctacaccaggttcaagaacaggt
agaaatgattacagaaacggtggtggccgacatggacatccaagcggggtgcctaggccc
tatggcggacgtggacggggccatggctcatataatggaagaggaaatgacagtagcagt
gaaagattagattctggttatggttcttccagatggagctcaggttccaaggatggggat
gatggctggaacaattttcctggtgccaaagttcaaaattctcccggcagagaagccttt
cctgggggctggggtggctgggccggtggaagtggtggtggtggtggtgctagtgcagat
ggtgatggtactgtggatcctggacctgatgccagaaattctgggtggggtgatggttct
aagaaaagtaatttagctcaaacggcggcaaatggttggtctggaagtagcagtggggga
tggactggtggcggtggttggtga
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integrated database retrieval system
