Telopea speciosissima (New South Wales waratah): 122668024
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Entry
122668024 CDS
T07910
Name
(RefSeq) AP-4 complex subunit epsilon-like isoform X1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122668024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122668024
Membrane trafficking [BR:
tss04131
]
Endosome - Golgi transport
Others
AP-4 complex
122668024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_2
HEAT
INTS1_R4
HEAT_EZ
PDS5
NPHI_C
V-ATPase_H_C
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
122668024
NCBI-ProteinID:
XP_043720483
LinkDB
All DBs
Position
7:complement(27746707..27787334)
Genome browser
AA seq
970 aa
AA seq
DB search
MGSQGGWGQSKDFLDLVKSIGETRSKAEEDRIVMNEIEILKRRITEPDIPKRKMKEYIIR
LVYVEMLGHDASFGYIHAVKMTHDDSLLLKRTGYLAVTLFLNDDHDLIILIVNTIQKDLK
SDNYLVVCTALTAVCKLINEETIPAVLPQVVELLGHPKESVRKKAIMALHRFYQRAPSSV
AHLLSNFRKKLSDNDPGVMGATLCPLFDLIIADANSYKDLVISFVSILKQVAERRLPKSY
DYHQMPAPFIQIRLLKILALLGNGDKQASEHMFTVLGDIFRRCDPSSNIGNAVLYECICC
VSSIHSSPKLLESAAEVTSRFLKQSDSHNLKYMGIDALGRLIKISPEIAEDHQLAVIDCL
EDPDDTLKRKTFELLYKMTKPSNVEVIADRMIDYMISINDNHYKTEIASRCVELAEQFAP
SNQWFIQTMNKVFEHAGDLVNVKVAHNLMRLIAEGFGGDDEGADSQLRSSAVESYLRIIG
EPKLPSLLLQVICWVLGEYGTADGKFSASYITGKLCDVAEAHPSDDIVKAYAVTAIMKIC
AFEIATGRKVELLPECQSLIDELSASHSTDLQQRAYELQTVLGLDALAVETIMPSDASCE
DIEVDKSLSFLNGYVQESLVKGARPYIPESERSGMADISNFRSRGHHDSSTHGLKFEAYE
LPKPSVASRIQPVPLATSKELVPVSQPTYPQEMSQAASMPSVPETGPSELKLQLDGVQKK
WGRPTYSPTVPSNSNSSSQKAVNGVAQLVVQGTVGPKTRDVSYDSRKPQVEVSPEKQKLA
ASLFGGSSSKTGKRPTSTSYKTTRVHSHAAEKSQIPTATVASTEHAAEKAPQPPPPDLLD
LGEPTPGYTVIDPFKQLEGLLPSDASSVANSGVSASKSSDIMSLHAESPMSGLIGTVANM
GPTNLDSANLLSSLSNLANRNVHGGPAAMQVAPVKKGPNPQDSLEKDAVARQVGVTPSGT
NPNLFRDLLG
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgggctcccaaggtggctggggccaatctaaagacttcttggatctcgtcaagtcgatt
ggcgaaactcgatctaaagccgaagaggatcgaattgtcatgaacgagatcgaaattctg
aagaggcgaatcacggagccagacatcccgaagcgtaagatgaaggagtatatcatccgt
ctcgtctatgttgagatgttagggcatgatgcgtcgtttggttacatccatgctgtgaag
atgacacacgatgattctctgctgctcaagaggactggatacttggctgtcacgctgttc
ctcaatgatgatcacgatctcattattcttattgtcaatactattcagaaggatttgaaa
tccgataattatcttgttgtttgtactgcattgacggcagtgtgcaagctgatcaatgaa
gagactattcctgcggtgcttccacaggtggtcgagcttcttgggcaccccaaggagtct
gttagaaagaaggctataatggctcttcatcggttttatcaacgggcaccttcttctgtt
gctcatctcctctccaatttccggaagaagctcagtgataatgatcctggggtcatgggt
gcaacactttgccctctttttgatcttatcatagctgatgcaaattcttacaaggattta
gttatcagcttcgtaagcattcttaagcaagtagcagaacgcagattgccgaagagttat
gattaccatcagatgccagccccattcatccagatcagattgttgaaaattttggcattg
ctgggtaatggtgacaaacaagcaagtgaacacatgtttactgttctgggtgacatattt
aggaggtgtgatccatcaagcaacatagggaatgctgttctgtatgagtgcatatgttgt
gtttcctccatacattctagccccaaattgctagaatctgctgcagaagtaacttctcga
tttctgaagcagagtgatagtcataatctaaagtacatgggcattgatgcccttggtaga
cttataaagataagcccagagatcgctgaggatcaccagcttgctgtgattgactgcttg
gaggatccagatgataccttgaagaggaagacttttgaacttctttataaaatgaccaag
ccttctaatgtggaagtgatagcggatcgcatgattgattacatgataagcattaatgat
aatcactacaaaacagaaatagcatctcgatgtgttgaacttgcagagcagtttgcgcct
agtaaccaatggtttattcagactatgaataaggtctttgagcatgcaggcgatcttgtc
aatgttaaggtggcacataatttaatgcggctaattgctgaaggttttggaggggatgat
gaaggtgcagatagtcaactgagatcctctgctgtagagtcatatctccgcattattgga
gagccaaaactgccatctttgttgttgcaagtaatttgttgggtcttgggtgaatatgga
actgcagacggaaagttttctgcttcctatatcactgggaagctatgtgatgtggcagag
gcccatccaagtgatgacattgtcaaggcatatgcagtgacagcaattatgaagatatgc
gcatttgaaattgcaacaggaaggaaagtggagttgttgcctgagtgtcagtcactgatt
gatgaattatcagcatctcattcaacagacttacagcagcgtgcatatgaacttcaaact
gtcttgggcttagatgctcttgctgttgagactataatgccatctgatgcaagttgtgaa
gacattgaggttgataaaagcctttcgttccttaatggttatgttcaggagtcattggta
aagggagctcggccttacattcctgagagtgagcgatctggaatggctgatattagtaat
tttaggagtcgaggccatcatgactcttccacccatggtctgaagtttgaggcttatgaa
cttccaaaaccttctgtggcatcaagaattcaaccagttccactcgcaacctccaaggaa
cttgttcctgtgtctcagccaacttatcctcaagaaatgtcccaggctgcatcaatgcca
tctgtccctgaaactggaccaagtgagctaaagcttcaacttgatggagttcaaaagaag
tggggtaggccaacttattccccaactgtgccatcaaactcaaattctagttcccagaaa
gcggtgaacggggttgcgcaacttgttgtacagggaacagttggcccaaaaactcgtgat
gtgtcttatgattcaaggaaaccacaggttgaagtttctcctgaaaagcagaaacttgct
gcgtccttatttgggggttcgtcatcaaagacagggaaaagaccaacatctactagctat
aagaccactagagtccacagccatgctgcagagaagtcacaaataccaactgcaacagtt
gcatctactgaacatgctgcagagaaggctcctcaaccacctcccccggatttgcttgat
ttgggcgagccaactccagggtatacagtaattgacccatttaaacaattggaaggactt
cttccttctgatgcctcttcagtagccaattctggggttagtgcttccaagtcttctgat
attatgtcacttcatgcagagagccccatgagtgggctgattggtactgtagcaaatatg
ggaccgactaatttggattctgcaaacctcttgtctagtttgtccaatttagccaataga
aatgttcatggaggacctgcagctatgcaggtggcacctgtgaaaaagggcccaaatccc
caagactccctggaaaaggatgcagttgcaaggcaggttggtgtaacaccttcaggtaca
aacccaaacttgttcagggacctgcttggctag
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