Telopea speciosissima (New South Wales waratah): 122668026
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Entry
122668026 CDS
T07910
Name
(RefSeq) protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122668026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122668026
Membrane trafficking [BR:
tss04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122668026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
122668026
NCBI-ProteinID:
XP_043720488
LinkDB
All DBs
Position
7:27454819..27469108
Genome browser
AA seq
766 aa
AA seq
DB search
MSEMAVSDPEGFDGVRMTWGVWPRTKVEASKCVIPIAATISPIRPHPDIPTLPYLPLRCK
TCTCILNPYCRVDFTAKIWICPLCFQRNHFPQHYSMISESNVPAELYPQYTTVEYAFTPS
VPDAASSVFLFVLDTCVIEEELGFAKSALKQAIGLLPDNALVGFISFGTQVQVHELGFSD
LTKVYVFRGTKEISKDQVLDQLGLSAAAHRPAPGNPKGAQQGLINSALVNRFLLPASDCE
YALNSLLDELQTDQWPVQHGNRALRCTGVALSVAAGLLGACLPGTGARIIALVGGPCTEG
PGMIVSKDQSEPVRSHKDLDKDAAPHFHKAVKFYENLAKQLVSQGHVLDLFASALDQVGV
AEMKVVIERSGGLVVLAESFGHSVFKDSFRRVFEDGEQSLGLCFNGTLEINCSKEIKIQG
IIGPCSSLEKKGPSCSDTVIGQGNTTAWKMCGLDKRTCLTVFFDISPSDRSNPQGALNPQ
LYLQFLTNYQNPEGQMRLRVMTVTRRWVDSAANAEELVEGFDQETAAVVMARLTSFKMEM
EEEFDATRWLDRSLIRLCSRFGDYRKDDPASFTLNPNFSLFPQFMFNLRRSQFVQVFNNS
PDETAYFRMLLNREHILNSVVMTQPSLISYSFNSPPAPALLDVTSIAADRILLLDAYFSV
VIFHGMTIAQWRNAGFQNQPEHQAFAQLLQAPHDDAQMIIQDRFPVPRLVVCDQHGSQAR
FLLARLNPSATYNSTHEVAAGSDVIFTDDVSLQVFFEHLQRLAVQS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagatggcggtttcagaccctgagggtttcgatggagttcgcatgacatggggc
gtatggccacgaacgaaggtggaagcgagcaaatgcgtgatcccaattgcagcgacgatc
tctccgatccgaccccacccagacatcccaaccctcccctaccttcctctccgctgcaag
acctgcacctgcatcctcaacccatactgccgtgtcgacttcacagccaaaatctggatc
tgccctttgtgcttccaacgcaaccatttccctcagcattactccatgatctccgaatcc
aatgtccctgctgagctctaccctcaatataccaccgtagaatacgccttcacaccctca
gtaccagacgctgcctcctctgtgttcctcttcgttctcgatacctgtgtcattgaggag
gagctagggtttgccaaatctgcgcttaaacaggctattgggttgttgcctgataatgct
ctagttgggttcatctcgtttggtacgcaggtccaggttcatgaacttgggttctcggat
ctgaccaaggtttatgtcttccgtggcacgaaagaaatctctaaggatcaggttttggat
caattgggcctcagcgctgctgcgcatagacctgcacctgggaatcccaaaggggctcag
caaggtttgatcaattcggctcttgttaatcggttcttgcttcccgcttccgattgcgaa
tacgcccttaattcgctacttgatgaattacaaacggatcaatggccggtgcaacatgga
aatcgagcattgcggtgcacgggtgttgctctcagtgttgctgcgggtcttttaggggct
tgcttgcctggtaccggtgcgagaattatagctttagtgggtggcccatgcacagaaggc
cctggcatgattgtgtcaaaagatcagtcagagccagtgcgttcgcataaagatcttgac
aaggatgcagcaccacattttcataaagcagtgaaattttatgagaatcttgccaagcag
cttgtaagccagggacatgtcttggatcttttcgcttctgcacttgatcaggtcggggtt
gcagagatgaaagtagtcattgaaaggtctggtggccttgtggttctggctgaaagtttt
ggccattctgtgtttaaagactctttcagacgtgtattcgaggatggtgaacagtctctt
ggcctttgcttcaatgggactcttgagatcaattgttcaaaggagatcaaaattcaggga
atcattggtccatgttcttctttggagaagaaaggaccttcttgttcagatacagttatt
gggcaagggaacacaacagcatggaaaatgtgtggtcttgataagaggacttgcttgaca
gtcttctttgacatttcacccagtgatcggtctaacccacagggagctttaaatccacaa
ttgtacttgcaatttttgacaaattatcagaaccctgagggacaaatgaggcttcgagta
atgactgttacaaggagatgggtagatagtgctgctaatgcggaggaattggtagaagga
ttcgaccaggagactgctgctgttgtaatggcaagattaacttcatttaaaatggagatg
gaggaagagtttgatgctacaagatggctggatcgatccctcatccgtttgtgttccaga
tttggtgactatcggaaggatgatcctgcttctttcacattaaaccctaatttctcacta
tttccacagtttatgtttaatctccggcggtcacagtttgttcaggtttttaacaatagt
ccagatgagactgcctacttccgcatgttattaaacagggagcatatcctcaactctgtg
gtcatgacacaaccatcactaatttcatattcatttaattcacctcctgcaccagcattg
ttggatgtcacttctattgctgccgatcgtatcctcttgcttgatgcatatttcagtgta
gttatattccatggaatgacaatagctcagtggcgtaatgcgggtttccaaaatcagcca
gaacatcaggcctttgcccagctattgcaagcaccacatgatgatgcccaaatgataatc
caagatcggtttcctgtcccaagattggtcgtctgtgatcaacatggatcccaggcaaga
ttccttctggctagattgaatccctcagctacttataactccacccatgaagtagctgct
gggtcagatgtgatcttcacagatgatgttagcttgcaagtgttctttgagcatctacag
aggttggcagtgcaatcttga
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