Telopea speciosissima (New South Wales waratah): 122668061
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Entry
122668061 CDS
T07910
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122668061
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tss01009
]
122668061
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122668061
03036 Chromosome and associated proteins [BR:
tss03036
]
122668061
Protein phosphatases and associated proteins [BR:
tss01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122668061
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122668061
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122668061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
122668061
NCBI-ProteinID:
XP_043720545
LinkDB
All DBs
Position
1:complement(29100645..29137446)
Genome browser
AA seq
540 aa
AA seq
DB search
MDMELAGDVASLDPELLQLPEVSPLALKSNPHIAEELFTQWLSLPDTSRLVKSLLDDAKA
GALTNVPGNSTTSNAAVSNSLPSMFPAGSAPPLSPRSISGSPRVMKQRAGPSSLGSPLKL
VSEPVKEVIPQFYFQNGRPPPNELKEQILSRIDQLFYGHMDGLQSHEFKAVTKEICKIPS
FFSTALFRKIDANCIGVVKRDAFVDYWVSTNRMTMDIATQIFTILKQPDRRYLTQDDFKH
VLRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYVNRSGNGHLTLRELKRGNLIAAMQ
HADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIF
SQIPRKFTSKVEGKMGYEDFVYFMLSEEDKSSEPSLEYWFKCIDLDGNGVLTPNEMQFFY
EEQLHRMECMAQEPVLFEDILCQMVDMIGPENESYFTLRDLKGCKLSGNVFNILFNLNKF
MAFETRDPFLIRQEREDPTLTEWDRFAHREYIRLSMEEDGEDASNGSAEVWDESSLEAPF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggatatggaactcgctggggatgtcgcttccctcgaccccgaattgttacagctccca
gaggtgtctcctttggcgcttaaatcgaaccctcacattgctgaagagttgttcacacag
tggctttcacttccagacaccagccgactggtaaaatctttgcttgatgatgcaaaggca
ggtgctctcacaaatgtccctggtaactctactacatccaatgccgctgtcagcaattca
ttgccttcaatgtttcctgctggcagcgcacctccactttcaccaagaagcatttctggc
tctcctcgtgttatgaaacagagagcaggtccttcttctttaggttctcctctaaaacta
gtcagtgaacctgtgaaggaagtcattcctcagttttactttcaaaatgggcgtcctcca
ccaaatgaactgaaagagcagattttgtctagaattgatcaacttttctatggtcacatg
gatggactgcaaagtcatgaatttaaggcagttacgaaagaaatctgcaagataccatca
tttttctccactgctcttttcagaaagattgatgctaactgcattggagttgtgaagagg
gatgcgtttgttgattattgggtcagtactaacaggatgacaatggatatagcaacacaa
atatttacaattttaaagcaaccggatcgtagatacctcactcaggatgatttcaaacac
gttcttcgagaacttttggcaactcatccggggttggaattcttacaaagcacgcctgag
tttcaggaaagatatgccgaaactgtcatatacagaatcttttactatgtgaatagatca
ggaaatggccatcttactctcagggagctgaaacgtggaaatctaattgctgcaatgcaa
catgcagatgaggaagaggatattaataaagttctgaggtacttctcatacgaacacttc
tatgtgatttattgcaagttttgggagctggatacagatcatgatttcttgattgacaag
gagaatcttattagatatggtaaccatgctcttacctacaggatcgttgatcgaattttc
tcacagattccaagaaagttcacaagcaaggttgaggggaaaatggggtatgaagatttt
gtttattttatgctgtcagaggaggataaatcatctgagcctagccttgagtattggttc
aagtgtatagatttggatgggaatggagttctcactcccaatgaaatgcagttcttttat
gaggaacagttgcatcggatggaatgtatggcccaagaacctgtgctttttgaggatatt
ttgtgccaaatggtcgacatgattgggccagagaatgagagttattttacattgcgtgac
ttaaagggctgcaaactttctggaaacgttttcaacatccttttcaatcttaataagttc
atggcctttgaaactcgtgatccatttcttattcgtcaggaacgtgaggatccaactttg
acagagtgggaccgctttgcccatagagaatatataaggctttcaatggaagaagatggt
gaggatgcctccaatggaagtgcagaagtttgggatgagtcgtcacttgaagctcctttc
tga
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