Telopea speciosissima (New South Wales waratah): 122668671
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Entry
122668671 CDS
T07910
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00040
Pentose and glucuronate interconversions
tss01100
Metabolic pathways
Module
tss_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122668671
Enzymes [BR:
tss01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122668671
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Cyclin_D1_bind
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122668671
NCBI-ProteinID:
XP_043721143
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Position
7:complement(52231267..52234336)
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AA seq
396 aa
AA seq
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MHITCFTSFSSKFETKLLPENDIIIINVADFGAKGDGKTDSSPSFLKAWTTACTSPKPTV
IIIPCKRYFLSPIVFQGPCNNSNLSFHFNGSVLIAPDYTKIPSFSQSYWLMFYGVKGVSL
IGGYLDSQGSSLWSCKLSGQHNCPAGATSLTIYDSKDILIRNLISSNAKLYHIVVHTCKN
VTLQSVGIYAPEKSPNTDGVHVQNSIDVCMLNTVIKTGDDCVSIGPGTRNLKILRVACGP
GHGISIGSLGKELEEDGVENVTVKNVVFTGTQNGLRIKSWGRPSNGFVRGVVFKQVVMNE
VQNPIVIDQNYCPDPLTSGCPNQNSGIKISNVTYADVKGTSASEVAMRFDCSASYPCKWI
GLRDIKLTYQENQPAQSFCRNIRGIALGLVTPPSCL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcacattacttgtttcacttccttctcgtccaaatttgaaaccaagctcttgcctgaa
aatgatatcatcatcattaatgttgcagattttggtgctaaaggtgatggcaaaacagat
tctagcccttcatttcttaaagcatggactactgcttgtacttctccaaaaccaactgtt
ataatcattccttgtaagagatactttcttagtccaattgtgttccaaggcccttgtaac
aattctaatctctcctttcatttcaatggctctgttcttattgctcctgattacacaaaa
atcccttctttttctcaaagttattggctcatgttttatggtgtcaaaggtgtttcactc
attggtggttaccttgatagccaaggctcaagcttatggtcatgtaaactttcaggccaa
cacaattgccctgctggtgcaacatcacttacaatctatgattcaaaagatatattgatc
agaaatttgatatcaagcaatgccaagctctatcatattgttgttcatacatgtaaaaat
gtaacactacaaagtgttgggatttatgctccagagaaaagccctaacacagatggagtt
catgttcagaattctattgatgtttgtatgttgaatacagttattaagacaggagatgat
tgtgtttcgatcggtccgggaacacggaacttgaaaatactaagagttgcatgtggacct
ggacatggaattagtattggaagtcttgggaaagagttggaagaagatggtgtggagaat
gtaacagtgaagaatgtagtttttacaggaacacaaaatgggttaaggattaaatcatgg
ggaagaccaagtaatggatttgtaagaggagttgtttttaaacaagttgtgatgaatgag
gttcaaaacccaattgttattgatcaaaattattgccctgatccactcacttcaggttgc
cctaatcagaactcaggaataaaaatcagtaatgtgacatatgcagacgtgaaagggaca
tctgcatctgaagttgctatgaggtttgattgcagtgcaagctacccatgtaagtggatt
ggattgagagatataaagctcacttaccaagagaaccaacctgcacaatctttctgccgt
aatatacgtggaattgctcttggattagttacacccccaagctgcttatag
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