Telopea speciosissima (New South Wales waratah): 122668723
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Entry
122668723 CDS
T07910
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122668723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tss03041
]
122668723
Spliceosome [BR:
tss03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122668723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
122668723
NCBI-ProteinID:
XP_043721197
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All DBs
Position
1:12319883..12352105
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AA seq
1011 aa
AA seq
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MDKTVEKEKSSRKTRDERERDRDRNRDYIKDHRRESDHHRDHERDRDQERERDHKHRTKD
SQLRESEERHHSDKYREEKHSLKDNDSVKDKVSGSRHSKDLRHGDGDWVRSRDYAQDYES
KREQSHELRDGREDNGGLKDRVLGSRHSKDDRHRDGDRHRSRDYLQDHESKRERSHLHKD
YESKHERSNEPRDGTEGSRDRVLHEESIERRSSTSHKRKEREESEEQLDKREKRVRDLDV
AKEERREKRRFGDKVVDDSKDLNGIVNDASRERRKVEDGVEEEMRDVTGREERRVRRKFG
DRLKEEGMMVVEEEMQPVSVINSEKNEAVDELVDNAQNTVSSNGSGSIGNGAALEPLNMA
SKVVPETSAPSQSPPIKVSSISTTNENKGVSVTRSHEVPGKSSTDGTTSAVGKSGSLSLD
ALAKAKRALQMQKELSEKLRKIPLLNKGASSDGSLQLGGSTNKKEPKALLSSAARDPGSI
PPTTDTIASTSQAKSSITNAFTAATASVKPPITGATAVPGLTTIPNIEAVKRAQELAAKM
GFHQDPEFAPLINMFPGHTATDVAVQQKPSKAPVLRLDALGREIDEHGNVINMPKLTNLS
TLKVNINKQKKEAFQILKPELDVDPESNPHFDPGMGINKTKLLRPKRMNFQFVEEGKWSK
DAEIIRFKSQFGEAQAKELKTKQAQLAKAKAEPDINPNLIEVSERVVNKEKPKDPIPETE
WWDIPLLLSGNYGNLSEGSISEDKLKMDKITIYVEHPLPIEPPAEPAPPPPQPLKLTKKE
QKKLRTQRRLAKEKDRQEMIRQGLLEPPKPKVKMSNLMKVLGSEATQDPTRLEMEIRSAA
AEREQAHVDRNIARKLTPSERREKKERKLFEDPNTLETLVSVYRINDLSHPQTRFKVDVN
AQENRLTGCAVISDGISVVAVEGGSKPIKRYGKLMLRRINWAASVGNEEDDDENEDKPDN
KCVLVWQGSAAKPCFNRFLVHQCRTEAAARKVFSDAGVGHYWDLAINHTDE
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggacaagactgttgaaaaggagaaatcaagtaggaaaacaagagatgagagggaaaga
gacagagataggaatagagattacatcaaagatcaccgcagagagtctgaccaccaccga
gatcatgagagagatagagaccaggaacgagaacgagaccacaagcatcgaacaaaagac
agccagttgagagaatctgaggagaggcaccatagtgataaataccgggaagagaaacac
tcattaaaggacaatgacagtgtcaaggataaggtttcgggttctcgacattccaaggat
cttaggcatggagatggggattgggtccggtcaagagactacgcacaagattatgaatca
aaacgtgagcaatctcatgagctgagggatgggagagaggacaatgggggccttaaggat
agggttttgggttctcggcactcgaaggatgataggcatcgagatggagatcgacatcga
tcaagggactacttacaggatcatgaatcgaaacgtgaacgatctcacctgcataaggat
tatgaatcaaagcacgagcgatctaatgagccgagggatgggacagagggcagcagggat
agagtcttacatgaagaatcaattgagagacgatcatccacttcgcacaaaagaaaagag
agagaagaaagtgaggagcagttggataagagagagaaacgggttagggatttggatgta
gcaaaggaagagaggagagaaaagcggcggtttggagataaggttgttgatgattctaag
gatctgaatggaattgttaatgatgcgagcagagaacgcaggaaagtcgaggacggagtg
gaagaagaaatgagagatgtgactggtagggaggaaagaagagttagaagaaagtttggg
gatcgactaaaggaagaaggtatgatggttgtggaggaggagatgcaaccggtttcagtt
ataaattctgagaagaatgaagctgtagatgagctcgtggataatgctcaaaacactgtc
agttcaaatggtagtggttccattggtaatggtgctgctctggaaccacttaatatggca
tcgaaggtagtgcctgagacttctgcacccagtcaatctcctcctatcaaggtatcttca
atttccaccaccaatgaaaataagggagttagtgttaccagatctcatgaggttcctgga
aaatccagtacagatgggacaacttcagctgttggcaagagtggaagtctgtctcttgat
gctttagcaaaagctaagagagctttacagatgcaaaaggagttgtcagaaaagctgaga
aagattccattgttgaataaaggtgcaagctcagatggtagcctacagcttggtggatca
acaaacaagaaggaacctaaagctctcttatcaagtgcagcaagggacccaggatctatc
ccgcctactactgatacaatagcttccacttcacaggcaaaatcaagcataacaaatgcg
ttcactgctgctacggcttctgtgaagccgcccatcactggcgcgactgctgttcctggg
cttacaaccatacctaacattgaagctgtaaaacgagcacaagaacttgctgcaaagatg
ggatttcaccaggatccagaatttgctcctcttataaacatgttcccagggcacactgca
acagatgttgctgtccagcagaagccatccaaagcccctgttctccgtttggatgcactt
ggtagagaaatcgatgaacatggaaatgtaatcaatatgcctaaactcacaaatctcagt
acattaaaggtaaacatcaacaaacagaaaaaagaagctttccaaattcttaaacctgag
ctggatgttgatccagaatcaaaccctcattttgaccctggaatgggcatcaataaaacc
aagctgttgaggcctaagaggatgaatttccagtttgtggaggaaggcaaatggtcgaag
gatgcagaaataattagattcaagagccaatttggagaagcgcaagctaaagagttgaag
acaaaacaagcacagctggcaaaggcaaaggcagagcctgatatcaatccaaatttgata
gaggtatcagagagagttgtcaacaaggaaaaaccaaaggacccaatccctgaaactgag
tggtgggacataccacttttgctttctggaaactatggcaacttaagtgaaggcagcatc
agcgaagacaaacttaaaatggataagattacaatttatgtggaacatcctcttcctatt
gaacccccagcagaacctgctccaccacccccacagcccctgaagcttacaaagaaggag
cagaagaaattgcgcacgcagaggcgcttagcgaaggaaaaagatagacaggagatgata
aggcaaggtctgttagaacctccaaagcccaaagtgaagatgagcaatctcatgaaagtc
cttggttcagaagcaactcaagatcccaccaggcttgaaatggagatacgaagtgcagct
gcagagcgtgaacaagcccatgttgacaggaacattgcacggaagctcacaccgtcagag
cgccgtgagaagaaagagcggaagctctttgaggatccaaatactctggagacccttgtg
tcagtgtatcggatcaacgacctgtcacacccacagacccgctttaaggttgatgtcaat
gcccaagagaaccgtctgacaggctgtgctgtcatatcagatggcattagtgtggtggcc
gtggaaggtggcagtaagcccatcaagagatatgggaagttgatgctcaggcgtattaat
tgggctgcgtctgtggggaatgaagaagatgatgatgaaaacgaagacaaacctgacaac
aagtgtgtgttagtgtggcagggcagtgctgctaaaccatgcttcaacaggtttcttgtt
caccagtgcaggactgaagctgccgcaaggaaagtgttctctgatgctggggttggtcac
tattgggatctggccattaaccatacggacgagtaa
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