Telopea speciosissima (New South Wales waratah): 122668828
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Entry
122668828 CDS
T07910
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122668828
Membrane trafficking [BR:
tss04131
]
Autophagy
Other autophagy associated proteins
Others
122668828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
WDR55
BCAS3_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
122668828
NCBI-ProteinID:
XP_043721303
LinkDB
All DBs
Position
7:complement(35621543..35641091)
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AA seq
548 aa
AA seq
DB search
MAALSACSSPSWPLPEPNPSSNPNSNFPTVPPDEIATISDQQPRAEADKHVKDEDVDGYD
GDGDEDEEGSFNVSSLTYAFLDNPSENGDSEAHFNFNTPSPPYSFVQNPSANPNYAFLDN
PSGDGDSEAQSSFDVPPHTYSFLENLGANPTYSFPENPSGDGDSETVSNFNNPSPTYSIV
QFPSDNPNLHNNLSSVPTLLHLSFNQDHGCFAAGTDNGFRIYNCDPFREIFRRDFDHGGG
IGVVEMLFRCNILALVGGGPDPQYPINKVMIWDDHQSRCIGELSFRSEVRAVRLRRDRIV
VVLEQKIFVYNFADLKLLHQIETIANPKGLCAVSQVAGSLVLVCPGLLKGQIRVEHYGSK
RTKFIMAHDSRIACFALTQDGKLLATASTKGTLVRIYDTSDGTLIQEVRRGADRAEIYSL
AFSSTAQWLAVSSDKGTVHVFSLKVNSGSPGNDNTQNVSGPNNAAPSTGSSLSFIKGVLP
KYFSSEWSVAQFRLHEDSQYIVAFGHQKNTILVLGMDGSFYRCQFDPVTGGEMTQLEYYN
FLKPDETS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctctccgcctgctcttctccttcatggcctctccctgagcctaatcctagt
tctaaccctaattcgaattttccaaccgttcctccggatgaaatcgccaccatctctgac
caacaaccaagagctgaagctgacaagcacgtcaaagatgaagatgtagatggatatgat
ggagatggagatgaagatgaagaaggttctttcaatgtttcttctctcacctatgctttt
cttgacaaccctagcgaaaatggagattctgaagctcatttcaatttcaataccccttct
cctccctattctttcgttcagaatcctagtgccaaccccaactatgctttccttgacaac
cctagtggagatggagattcagaagctcaatccagtttcgatgtccctccccacacctat
tcgttccttgaaaaccttggcgccaaccccacctattctttccctgaaaaccctagcgga
gatggagattcagaaactgtttccaatttcaataacccttctcccacctattctatcgtt
caatttcctagcgacaaccccaatctccataataatctgtcttccgtccccacgctcctt
cacctctccttcaatcaggaccatggctgctttgcggctggaacagataatggattccgg
atctacaactgcgatccctttcgcgaaattttccggagagactttgatcatggaggtggt
atcggtgttgtagaaatgctctttaggtgcaatattcttgcacttgtagggggtggacct
gatccgcagtacccgatcaacaaggtcatgatttgggacgatcaccagagccggtgcatc
ggcgagttgtcatttagatctgaggtgcgtgctgtccggcttcggcgtgatcgtattgtt
gtggttttggagcagaaaatattcgtgtacaattttgcggacttgaagctattgcaccaa
attgagacgattgccaatcccaaggggctgtgcgctgtgtcacaggtggcgggttcactt
gttttggtttgcccaggactgctgaagggtcagattagggttgagcattatggatcaaag
cgaacaaagttcataatggctcatgactcgaggattgcgtgtttcgcacttacccaggat
ggcaaattgctcgctaccgctagcaccaagggcacgctagttcggatatatgatacttct
gatgggactcttattcaagaggtccgtaggggtgctgatagagcagagatctacagccta
gctttctcttctactgcacagtggctagccgtgtcaagtgacaagggcacagttcatgtc
ttcagcctcaaggttaattcaggatctccaggaaatgataatacacaaaatgtctctggt
cccaataatgctgccccatcaactggttcatcactctccttcattaaaggggtgttgcca
aagtattttagctcagaatggtcagtggcacaatttcgtctgcatgaagattctcagtac
attgttgcttttggtcatcagaagaatactattctcgttctcggcatggatggaagcttc
tatcggtgtcagtttgatccggtgactggtggtgagatgactcaactggaatattacaac
ttcctgaagccagatgagacttcctag
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