Telopea speciosissima (New South Wales waratah): 122668855
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Entry
122668855 CDS
T07910
Name
(RefSeq) BRCT domain-containing protein At4g02110-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122668855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tss03032
]
122668855
03400 DNA repair and recombination proteins [BR:
tss03400
]
122668855
DNA replication proteins [BR:
tss03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
122668855
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
122668855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
122668855
NCBI-ProteinID:
XP_043721345
LinkDB
All DBs
Position
7:53302642..53310864
Genome browser
AA seq
1249 aa
AA seq
DB search
MFIGVRFVLIGFDPVIEAKIRSKLVSGGGVDVGEYGPSCTHVIVDNIVNDAFVCVAARND
GKTLVTGLWVDHSFDIGMPADANLILYRPVKDLNGIPGAKSLYVCLTGYQRQDREDIMKM
VGMMGAQFSKPLVANKVTHLICYKFEGEKYELAKKMKIKFVNHRWLEDCLRVWKIVPEAN
YAKSGYKSEMMEAEAKDSEEETGEDYSNKQCEGSNVTGSPFGLISGTPRDSKSPMPTGEV
LEFCQKNVLPKGLSNCAENITSDNRLLTTTVKDTRSDEAPNFHHVNIRGHGDFSCHSNGA
SFGDAVGGGTSIPFDTISNLTKECNEITSNSRTAARSPHSDAAKLVTVRYSRRTPRRSSV
STSAEPSGHAHEFSKGSLEGKKVNLGFGTSSLTVEQSKDNIDSDCGALYHQGGKTGTLPQ
KRELAVSSNDIRSPNEESHDPKVCASVSPSGGTLEGLEYESMIIGAPPTRTDPTPSDNKH
HSNAIAYVNSVEKQRNGPSMKNSFSSNQISLNCGLPVLKTLTFNSTESPSNMRADGLPPE
KTSGISMEALKSFNLASEPDIQDVQISRTADLPAEIKTELQKQLLDVKVSSPNIKTTVSE
ESKSPISLGIFKGVNDRLATKKVVGQKGLGSRPSTVKSNKLKCSFSFDKTAISNGAAVCP
MMGIEGAQDEQTVAEKHNICWPTSAADVIMGEEIKGEKTKSLDDKTEASEEKDGDVLEKP
LTEKLEMVKPTSYADTLTMDADRAPVEGGKGGDGHSSAMSVKKTDMCESRKAVSTVAGIK
TYQKGKKGNGLREGKVGAELDKGIDNKKTEMHESTFKEEMAKEENHSPKKIKGNTLSSRY
EIETSDKGKDREELGEGQGGSELEKSFSAEMTERGKSTADVVKKDSAKRKRHPSSKTNRK
TVSTVNGIEMSDEGKSREETPKNIGVQKTELPKACPTGKTMAASKRKKSVDAEKENKPIR
NEVPSLKLSKHGKTSKAPIRSNQMVGETDLNTFQAGGSCNIVKLEPVWFILSGHNLQRKE
FQQVIRRLKGRVCRDSHHWSYQATHFIVPEPVRRTEKFFAAAASGRWILKTDYLTASNQA
GKFLPEEPYEWYRSGLSEDGAINFEAPRKWRLLRKRTGHGAFYGMRVIIYGECIAPPLDT
LKRVLKAGDGTILATAPPYTRFLKSGVDFAIVSPGISRIDSWVQEFLRHEIPCVLADYLV
EYVCKPGYSLERHVLYNTHAWSEKSFANLLTRSEENIEALTGGGDDDLW
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgtttattggcgtgcggttcgtcctaataggatttgatcccgtcattgaagcgaagatt
cgatctaagcttgttagtggaggtggagttgatgtcggagaatacggtccgagttgcact
cacgttatcgtggacaatattgttaatgatgcttttgtttgtgttgctgctcgcaatgat
ggcaaaacacttgttactggcttatgggttgatcatagttttgatatcgggatgcctgcg
gatgcaaatttgattttgtacaggcctgtaaaagatttaaatggaatcccaggtgccaaa
tctctgtatgtttgcttgacaggataccaaaggcaagatcgagaagatattatgaaaatg
gtaggcatgatgggcgcacagttctccaagccactggttgcaaataaagttacccatctt
atatgttacaaatttgagggagagaagtatgagcttgcaaagaaaatgaagataaaattt
gtcaatcatcggtggttggaagactgtttaagagtatggaagattgtcccagaagctaat
tatgccaagagtggttacaagtcagagatgatggaagctgaagctaaggattctgaagaa
gaaactggggaggattatagtaataagcaatgtgaggggagtaatgtcacagggagccct
tttggcttaataagtggaactccgagggactccaaatcgcccatgcctacaggggaagtg
ttagagttctgtcagaaaaatgtcttgcctaaaggtttgtcaaattgtgccgaaaatatt
acttctgacaataggctattaactactactgtaaaagataccagatctgatgaagccccg
aacttccatcatgtaaatataaggggccatggggacttcagctgtcacagtaatggagct
tcttttggggatgctgttggtggtgggacatccattccatttgacactatatccaacctc
accaaagaatgtaatgaaataacatctaactcaagaactgcagcacgatcccctcactct
gatgcagcaaagttagttacagttagatactccaggagaaccccaaggaggtcctcagtt
tctacttctgcagaaccttcaggtcatgcacatgaattttcaaaaggaagtttagaagga
aagaaagtcaaccttgggtttggaacttcttccttaacagtagaacaatccaaggataat
attgattcagattgtggagctttatatcatcagggagggaaaactggtacattacctcag
aagagagaactggctgtttctagtaatgatattagatcaccaaatgaggaaagtcatgat
ccaaaagtttgtgcttctgtaagtccatcaggaggtactcttgaaggtttggagtatgaa
tcaatgataattggtgcacccccaacgagaactgatcctacacctagtgataataaacat
cattcgaatgccattgcttatgtgaattctgttgagaaacagcgaaatggtccatcaatg
aagaactcctttagttctaaccagatatcattgaattgtggattgcctgttttgaaaact
ttaactttcaatagtactgaatctccttctaatatgagggcggatggccttcctccagag
aagacatctggaatatcaatggaggctttaaagagtttcaacttagctagtgagcctgat
atacaggatgtccaaatcagcagaacagctgaccttcctgctgagataaaaacagagctc
cagaagcagctcctggatgtcaaggtttcatctcccaatatcaaaaccacagtgagtgag
gagtccaaaagtcctattagtttgggcatatttaagggagtgaatgatagattggctacc
aagaaagtggttggccaaaaaggtttgggctctaggccaagtaccgttaaaagtaataag
ttgaagtgttcgtttagctttgataaaactgcaatctcaaatggagctgctgtctgtcca
atgatgggtatagagggagcacaagatgagcaaacagttgctgagaaacacaatatttgt
tggccaacatcagctgcagatgtaatcatgggggaagagataaaaggggagaagactaaa
agtctcgatgataaaactgaagcatcagaggaaaaagatggagatgtgcttgagaaacca
ctcactgaaaaattggagatggttaagccaacctcttatgctgatacattgaccatggat
gctgatagagcgcctgtagaaggcggcaagggtggagatgggcattcaagtgctatgagt
gtaaagaagactgatatgtgtgaatcaaggaaagcagtatctactgtggctggaatcaag
acataccagaaaggaaaaaaagggaatgggctaagagaagggaaagttggagctgagctt
gataagggaattgataacaagaaaactgagatgcatgaatcaacttttaaagaagagatg
gctaaggaggaaaatcactcaccaaagaaaatcaagggaaatacactatcctctaggtat
gagatagaaacatctgacaaaggtaaagacagagaagaattaggggaaggacaaggggga
tctgagctcgagaagtcatttagtgcagaaatgactgaaaggggaaaatcaacagcagat
gtggtaaagaaagacagcgctaaaaggaaaaggcatccttcaagtaaaaccaacagaaag
actgtctctactgtaaatgggattgagatgtctgatgaaggcaaaagtagagaagagaca
ccgaagaacattggtgttcagaagacagagttgccaaaggcatgccctacaggtaagact
atggctgcaagtaagaggaagaagtctgtggacgccgaaaaggagaacaagccaatcaga
aatgaagttccgagtctaaaattgtccaaacatgggaagaccagtaaagcccccattaga
agtaatcaaatggttggtgaaactgatctgaacacatttcaagctggtggaagttgtaat
attgtaaagcttgaaccagtgtggtttattctgagtggacataatctacagaggaaagag
ttccagcaggttataaggcgtttgaagggaagagtttgcagagattctcaccactggtcg
taccaggccacacacttcattgtcccggaaccagttcgccgaacagaaaagttttttgct
gctgcagcatctgggaggtggattctcaagactgattacttaactgctagtaatcaggca
gggaagttcttgccagaagaaccttatgaatggtatcggagtggccttagtgaagatggc
gcaatcaattttgaggctccaaggaagtggcgcctcttaaggaaaaggactggtcatgga
gctttctatggaatgcgtgttatcatatatggagaatgcattgcaccacctctggatacc
ctgaaacgtgtcttgaaggctggagatggcaccattctagcaacagcccctccatacacc
cgttttctcaaatctggagttgattttgccattgttagccctggaatctcacgcatcgat
tcatgggtccaagagttcttaagacatgaaatcccttgtgttttggctgattacttagta
gagtatgtatgcaagccgggatattccctcgagaggcatgtgctttacaatactcatgct
tggtcagagaagtcatttgcaaatttgttaacccggtcagaggaaaacatagaggccttg
acagggggaggtgatgatgatttgtggtga
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