Telopea speciosissima (New South Wales waratah): 122668973
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Entry
122668973 CDS
T07910
Name
(RefSeq) sister chromatid cohesion 1 protein 4-like isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tss03036
]
122668973
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
122668973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
122668973
NCBI-ProteinID:
XP_043721512
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All DBs
Position
7:51771210..51813424
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AA seq
1412 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL
LGVVRIYSRKVNYLFHDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDSALFQGNYVDHHVSTREQITLQDTMDGVVYSTSQFGLDERFGDGDTSQIGLDLDEDL
FLDKAIASRHAEDLLATENVDPPQPCGEPMTPFTGMDIDDDENYAERTAGIPEVILPDCS
GKQIGSNAQELKMDDESAIHSDRIETPDLNAEGFRYEQIEGRCTNPTTDLVDYTVSPSTT
ALAENAILANVEVDPNQMASSFQPEDCNSINLVVTGKLGDSFKEPDVNIGNANNALECSL
HNGENPGADVLCMPVGENESLMGGVQAIHVKQGNSTPVAGSMDLVTSDISRCVSSPTSVL
GEQPKPVSPVLESSDRIAAVVDGQEGIISNNGLAVSIAVQKHSEDMATQTIAVDTTAAFP
ACSHEALMLEEACGGPSCINGSVSYKETSEPEDFKRGKLVGDCAESCSCSHELQSSADFL
SGSAGRHELGQVEDNASAQPQDSNIVNACGSSEKSHACSHVLRPCSFHSNQPGVSSLPDG
SLVEIIPDVSSKGDGMCLTKTSEREEMAQASTLSADMQGEGCNLGFEANVATEPFRPEEV
QALGKADEHPDGVILGDTQLQTSNFSTSSDLPAPETLLSAPAGAELPADVMIELISDKTE
VSGDGSKILSGKRRRSMESTPVLHSAELSGLPQSRNLDSIPDDNDLLSSILVGRRTLALK
VRPTPPPEGPSSKRPRMAVRAHAPKRKVLVDDTMVLHGDTIRQQLTNTEDIRRIQRKAPC
TRPEIWMIQKQLFEDEIFNEPIFTGMSMKLIGLQNRTYDLTKAGLDQVDANCIPFGVLKG
REHVVSTDIAKETSLEGCSENVTVRNDGEALPAGVHGQAKDQHFEEYTTLEGCGEAVLVT
KESEAQTAETLVQTENQQQGEHSIRSCRHDTQGQTGSPTDTAPLGSSKDGQSEEITAMEL
ERVDDGISDVVDHVATPGAELVVPSGPLSGDNSNLSTDSFKLSSVDNSGGAEVILQNNEE
HSSPNQKLDFEPDEKGALTVCGNDGNDIQAIHIVEVNGKSSIPPEVLPAAKDESVLVEAE
SGRLLAQDCQIGEGKDTSSAVSVAELDNCSVETSADVQVAPSTPSFENINSSFPGICLES
GEQTDVVLTISYQSIGENNGFLDESVTKSEQAMDEDGPTIGIDYPLEPNVDMEDVFFPEG
EDPSCVGANQNNTTDAKVCAFHSSAGDSDVFEDVIDGNDTEFLNVDDDEVAEEEDNIMPS
AEDSQFFENSGWSSRTRAVARYLQTMFDNDARHERKVVHMDNLLAGKTRKEAARMFFETL
VLKTRDYVHVEQENAFAGINIKPRGKLMKANF
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcgcagtttatattggccaagaaagggccacttggaaccatatggattgcg
gcacatttggagaggaaacttcggaagaatcaggtggctgatactgatattggcgtctca
gtagactcaattcttttccctgaagtaccaattgcacttcggctatctagtcatcttctg
cttggggtggtgaggatatattcccgaaaggtgaattatcttttccatgattgcagcgag
gctttgcttaagataaagcaagcttttcgctccactgcggttgatctgccaccggaagaa
tctactgcaccctatcactccattaccttgccagagacttttgatcttgatgatttcgag
ctaccagacagtgcactttttcagggtaactatgttgaccatcatgtcagtacgagggag
cagattacacttcaagataccatggatggtgtggtctattccacttcacagtttggcttg
gatgagcgatttggtgatggtgatacttctcagattggcttagatcttgatgaggacttg
tttttagataaggctatagcgtctcggcatgctgaagatttgttggctacagaaaatgtg
gatcctcctcagccatgtggtgaacccatgacaccattcactggcatggacattgatgat
gatgagaattatgccgagaggacagctggaattccagaagtcatattgcctgattgtagt
ggcaaacagattggttcaaatgcccaagagctgaagatggatgatgaatctgctattcat
agtgatcgaattgaaactccagatctaaatgctgagggctttcgatacgaacagattgaa
ggccggtgtacaaatcctacaacagatttggttgactatactgtgtctccatctaccacg
gcattagcggaaaatgcaatcctggccaatgttgaagtggatcctaaccagatggcttca
tcatttcagcctgaagattgcaattcaattaatttggtggtgacagggaaactgggtgat
tcttttaaagaaccagatgtcaatattggaaatgcaaacaatgcattggagtgttctttg
cataatggtgagaatcctggggctgatgtcctttgcatgcccgttggggaaaatgagtct
cttatgggtggtgtgcaggccatccatgtaaaacaaggaaattctacacctgttgcagga
agtatggatctagtaacttcagatatttctcgttgtgtgtcctcacctacttcagttcta
ggtgaacaacctaaacctgtttctcctgttttggaaagttcagacagaattgcagctgtg
gtggatggtcaggaagggattataagtaataatgggttggctgtttccattgctgttcaa
aaacattctgaagatatggccacacagacaattgctgttgacacaactgcagcatttcct
gcttgttctcatgaagctctcatgttggaggaagcctgtggtggaccatcttgtattaat
ggcagtgtttcatacaaggagacctctgagccagaagatttcaagagggggaaacttgtt
ggggattgtgctgaatcatgttcctgtagccatgaattgcagtccagcgctgattttctg
tcaggatcagcaggtagacatgagcttggtcaagttgaagataatgcttctgcacagcca
caagattccaatattgtgaatgcatgtggttccagtgaaaaatctcatgcttgcagccat
gtactacgaccatgcagtttccactctaaccaacctggtgtatcatctctcccagatggt
agtttagtagaaataatccctgatgtatcctccaaaggagatgggatgtgcttaaccaag
acatcggaaagggaggagatggcacaggcttctacactttcagctgatatgcaaggtgaa
gggtgtaacctaggctttgaggcaaatgtagctacagaaccatttcggcctgaagaagtt
caggcacttggcaaggcagatgagcatcctgatggtgtcatcctgggagacactcaattg
caaacttccaatttttcaaccagttctgacttgcctgctcctgaaacattgctttcagcc
cctgcaggggctgaattacctgctgatgtaatgattgaactaatttcagataaaacagaa
gtaagtggggatgggtccaaaatcctttctggtaaaaggcgtcgttcaatggaaagtaca
ccagttctacattcagctgagctttctgggttgcctcaatcaagaaatttggattctatt
ccggatgataatgatttattgtcatccattttagttggaagaagaacgttagctttgaaa
gtgagacctactccgccacctgaaggaccatcttcaaaacgcccccgaatggctgtccgt
gcccatgcccccaagaggaaggtgcttgtggatgataccatggtcttgcatggcgataca
atacgacagcaattgacaaatactgaggacatacgccgaatacaaaggaaagctccttgt
acccgtcctgaaatttggatgattcagaagcaattgtttgaagatgaaatcttcaatgaa
cccattttcactggaatgtcaatgaagttgattggtttgcagaatcgaacatatgatttg
actaaagctgggcttgaccaagttgatgcaaattgcattccttttggagtactaaagggt
agggagcatgtggtgagcacagatattgccaaagaaactagtttggaaggttgcagcgag
aatgtcactgtcagaaacgatggggaagcactacctgctggagtacatggccaggccaaa
gaccaacatttcgaagagtatacaaccttagagggttgtggtgaggctgtattagtgaca
aaggaaagtgaagcacaaacagctgagacacttgtacagactgagaaccagcagcagggc
gaacattccattaggtcctgcaggcatgacactcaagggcaaacagggagtccaactgac
acagctccattgggctcatcaaaagatggacagtcggaagaaataactgccatggagttg
gagagagtggatgatgggatttctgatgtagtggatcatgttgccactcctggggctgaa
ctagtggtaccctctggtcctctctctggagataatagtaatttgtcaactgattctttc
aagttgtcttctgtggataacagtggtggagcagaagttattctgcagaacaatgaagaa
cattcctctccaaatcagaaattggactttgagcctgatgaaaagggtgctttaactgtg
tgtggtaatgatggcaatgacattcaggccattcatattgtggaagtgaatggcaaaagt
tcaattccacctgaggttttacctgctgcaaaggatgagtctgtactggtggaagccgaa
agcggcaggttattagctcaagactgccagattggcgaggggaaggatacttcttctgca
gtgtctgttgctgaactggacaactgttcagttgaaacaagcgcggatgtgcaagtagct
ccctctaccccctcatttgaaaatataaattcttcctttccaggcatttgtttggaaagt
ggtgagcaaactgatgtggttcttacaatcagttatcagagcattggagagaataatggg
tttttagatgagagtgtaacaaagtctgagcaagccatggatgaggatggcccgactatt
ggtattgattacccattagaacctaacgttgacatggaagatgttttctttcctgaagga
gaggatccaagctgtgtgggtgccaatcaaaataacactacagatgctaaagtttgcgcg
tttcatagttctgctggagattctgatgtttttgaggatgtaatagatgggaatgacaca
gagtttcttaatgtagatgatgatgaagtggccgaagaagaggacaacattatgccaagt
gccgaagattcacagttttttgagaacagtggatggtcctcccgcacaagggctgttgca
aggtatctccaaaccatgtttgataatgatgctcgccatgaaagaaaagttgttcatatg
gacaacctcttggctggtaaaacaaggaaggaagcagccaggatgttttttgagactttg
gttcttaaaacaagggactatgtccatgttgaacaagagaatgcatttgcgggcatcaat
attaagcctagaggaaagctcatgaaagcaaacttctaa
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