Telopea speciosissima (New South Wales waratah): 122669028
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Entry
122669028 CDS
T07910
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122669028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122669028
03036 Chromosome and associated proteins [BR:
tss03036
]
122669028
Transcription machinery [BR:
tss03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122669028
Coactivators
SAGA/TFTC/STAGA complex
122669028
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
122669028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
UPRTase
MCM_lid
Motif
Other DBs
NCBI-GeneID:
122669028
NCBI-ProteinID:
XP_043721576
LinkDB
All DBs
Position
7:complement(58781189..58824878)
Genome browser
AA seq
979 aa
AA seq
DB search
MDPSIMKLLEDDEDETMHSGADVEAFTAALNRDIEGGTSTSQPSDPENAILSHAGNPASN
QLVPQWHNSNQEENVTSQTHQEEPNNMQSQVQHSTETVLMQSGSGAENQQQQIVSSQEHS
ELPMQQKQSNDDQQQQQVEQNSLQMSQKNGAQICEQSPGHLPEKERVPLVNSQNQYPKLQ
KMNNQITLSADIANNPNFRGKQVPFALLIPNIMPHLDEDRAMQLQTLFTKLRKNEINKEG
FVRALRTIVGDHMVKQAVAKVQMQELAKAQSARNSQTGPHQFQLQSQASLQHQHQPPQQQ
HPQQQQQQLQQPKMTNAQQFSDPQSFTQLHQKGQKSSTDLSQIPTSTTQGKNDSSFPTTE
SSSQKSRETEHQSDSPGMHLSQTSSASMSLVNQEKGLSSIQIQGINKQQQQLPLPHTSFP
MYGTMVGNYHSTHAYSGPSISGATTSLKSQTQDSQMRQVPLHQGMVSNQLGGATQPMNMM
IMPKYEMQNSLTEPKRLQGGTHSTSHSTMQQNPAQWQSSVSEEQKGGALSSMAYVKQELV
DQTAEQQQMPQLSASQGSSSLVPVQVDQEETTEKQGARIPFSTSTNAVLSNSASGSIATP
MDATPPMRPQIPSATISVGSGTNLKTPPKKPSISQKRPVEAAGTPSPLSSKKQKVSGAFL
DQSIEQLNDVTAVSGVNLREEEEQLLSAPKEESRASEATRRVVQEEEERLILQKIPLQKK
LAQIMSKSGIKSVSNDVERCLSLCVEERMRGLISNMIRLSKQRVDLEKPRHHTIITSDVR
RQILMMNRKAREEWEKKLAEEAEKQRKLNEAEGNTGVDGDKDKDEARTKTLKANKEEDDK
MRTTAANVAARAAVGGDDMLSKWQLMVEQARQKREGGGDGSNSVQPGRELSRKALSTMGR
TTMDNQEVENRGLSAAAASGPARKFGRNSAVVPQSKVARTISVKDVIAVLEREPQMSKST
LMYRLYEKIHADAAANDRR
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggatccttccatcatgaagctccttgaagatgacgaggatgaaaccatgcattctggt
gcagatgtagaggcgttcactgctgccttgaatagagacatagagggtggtacctccact
tctcagccatcagatccagaaaatgcgatcttgtcccatgctggcaatcctgcatccaat
cagctggttccccaatggcataattccaatcaagaagaaaatgtcacctcccaaactcat
caagaagaaccaaacaatatgcagtcacaagtccagcattcaactgaaacagtgctgatg
cagtctggatctggtgctgagaatcagcagcagcaaattgttagctcacaagaacacagt
gaactccctatgcaacagaaacaatcaaatgatgatcagcaacagcagcaggtggagcaa
aactccctccagatgtctcagaaaaatggagcccaaatttgtgaacaaagtcctggtcac
ttgcccgaaaaggagagagtgccgctggtaaacagccaaaatcaatacccaaaattacaa
aagatgaacaatcaaattacactttctgcagacattgcaaataacccaaattttcgtggt
aaacaagtaccatttgctttgttgatcccaaatataatgccgcaccttgatgaagaccga
gctatgcagcttcagacactttttactaaattgaggaaaaatgaaatcaacaaagagggc
tttgtccgggctctgagaactattgtaggggatcatatggtcaaacaggctgtagcaaaa
gtccagatgcaggaactagccaaagctcagtctgcccgtaactcacagacaggaccccat
cagtttcagttacagtctcaagcttctttgcagcaccagcatcagcctccacagcaacag
catccacagcaacagcagcagcagctgcaacaacccaaaatgacaaatgcacaacagttc
agtgatccacaatcatttactcaacttcatcagaagggacaaaagtcttccactgaccta
tctcagattccaacttcaacaactcaaggaaaaaatgattcaagctttcctaccacagaa
agcagctctcagaagtccagagagacggaacatcagtcagattcaccaggaatgcatttg
agccaaacatcttctgccagcatgagcttggtcaatcaggaaaaggggctctcctccatt
caaatccaagggattaacaagcagcagcagcaattgccccttccacacacatctttccca
atgtatgggaccatggtgggcaattatcattctactcatgcatattcagggccatctatc
agtggtgcaacaacttctcttaaatcacaaactcaagattcacaaatgaggcaagttccg
cttcatcaaggcatggtttcaaatcagttaggaggggcaacccagcccatgaacatgatg
attatgcctaaatatgagatgcaaaactctcttactgagcccaagagattgcaaggtgga
actcactcgacaagccattcaacaatgcaacaaaatccagctcagtggcaatcatcagtg
agtgaagagcaaaaaggtggtgctttgtcatcaatggcttatgtgaagcaggaattagtt
gatcagactgctgagcagcagcaaatgccccaattgtcagcttcccaaggttcatcttct
ttagttcctgtacaggttgaccaagaggaaaccacagaaaagcagggggctagaattcct
ttctcaacatctacaaatgcagtgctttcaaattcagcttcgggttccatagcaacacca
atggatgctactccgccgatgcgccctcaaatcccatctgcaaccatctcagttgggtct
ggaactaatttgaagacacctccaaagaagccttctatcagccaaaagagaccagttgaa
gcagctggcactccatcccctttgtcaagtaaaaaacaaaaggtgtctggggcttttctg
gatcaaagcattgaacaactcaatgatgttactgctgtcagtggagttaatttgagggaa
gaggaagagcagctattatctgcacctaaagaggaaagtcgggcttcagaagctactcgg
agggttgtgcaagaagaagaagaaagactgatactgcagaaaataccccttcaaaaaaaa
ttagcacaaatcatgtccaaaagtggcataaagagtgtaagtaatgacgtggagcgttgc
ctgtcattgtgtgtagaggagagaatgcgcggtttgataagtaatatgatcagactatca
aaacagagggttgatctcgaaaagccaagacatcatactattattacctctgatgttcgg
cggcaaattttaatgatgaaccgaaaagccagagaggagtgggagaaaaaactggctgaa
gaagctgaaaagcaaaggaaacttaatgaagcagagggaaacactggtgttgatggtgac
aaggacaaggatgaagctcgtacaaagacactcaaggcaaacaaagaggaagacgataaa
atgcgaacaactgcagcaaatgttgctgcccgagcagcagttggaggggatgatatgcta
tcaaaatggcaactcatggtagagcaagcccgacagaagcgtgaaggaggaggtgatgga
tcaaatagtgttcagcctggtagagagctgagccgcaaggccctgtcaaccatgggaaga
accactatggacaatcaagaagtagaaaacagaggcctttctgctgctgcggcatctggg
cctgcaaggaaatttggcaggaactctgctgttgtgccacagtcaaaggttgcacggacc
atttctgtcaaggatgtaattgcagtcctggagagggagccccagatgtcaaagtcaact
ttaatgtatcgtttgtatgagaaaattcatgctgatgctgcggcaaatgatcgaaggtga
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