Telopea speciosissima (New South Wales waratah): 122669097
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Entry
122669097 CDS
T07910
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tss03041
]
122669097
Spliceosome [BR:
tss03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122669097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
Nup35_RRM_2
RRM_PARP14_3
TGF_beta
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
122669097
NCBI-ProteinID:
XP_043721702
LinkDB
All DBs
Position
7:complement(6015337..6023802)
Genome browser
AA seq
448 aa
AA seq
DB search
MTEPSKVIHIRNVGHEISENDLLQLVQPFGVVTKLVMLRAKNQALLQMHDVASAVNVLQY
YTNVQPSVRGRNVYIQFSSHQELTTMDQNAQGRKGDQDSQPNRILLVTIHQLLYPITVEV
LHQVFSPHGFVEKIVTFQKSAGSQALIQYQSRQSAVQARNALQGRNIYDGCCTLDIQFSN
LSELQVNYNNERSRDFTNPALPSEQKGRSSQPGYGDAGGLYALQPGARAAVAFPQMGNSA
AIAAAFGGGLPPGISGTNDRCTLLVSNLNLDKVDEDKLFNLFSIYGNIVRIKFLRNKPDH
ALVQMVDGFQAELAVHFLKGAMLFGKRLEVNFSKHTNITSAPDTHEYLNSNLNRFNRNAA
KNYRYCCSPTKMIHLSTLPQDITEEEIMAHLEEHGNIVNTKLFEVNGKKQALVLFETEEQ
ATEALVCKHATTVDGSVIRISFSQLQTI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccttcaaaagtcatccatatccgcaacgttggacacgaaatatctgagaat
gatctccttcagttggtccaaccttttggtgttgtcactaagcttgttatgctacgtgct
aaaaatcaggccctactccagatgcacgatgtagcttcagctgtgaatgtgttgcaatac
tacacaaatgtgcagccgagcgtcagggggcgaaatgtgtatattcagttctcttcacat
caagaactcaccacaatggatcaaaatgctcaaggacgcaaaggggaccaggattcacaa
cccaaccgaattctcttagttacgatccatcagctgctctatcctataacagtggaagtg
ctgcatcaagtgttttctcctcatgggtttgtggagaagatcgtcacatttcagaagtct
gctggttctcaagcccttatccagtatcaatcacgccagagtgctgttcaagcaagaaat
gctctccaaggtcgtaacatttatgatggctgctgtacactggatattcaattttcaaac
ctaagtgaattacaagtgaactacaataatgaacgctcaagggatttcacaaacccagct
ctgccttcagaacagaagggaagatcctcacaacctggatatggtgatgcagggggcctg
tatgcacttcaacctggagccagggcagcagttgcatttccgcagatgggcaactctgca
gccatagcagctgcatttggtggaggattgcctcctgggataagtggtactaatgacagg
tgcacgctcctggtttctaatctaaatcttgataaagtcgatgaagataaactcttcaac
cttttttccatctacgggaacattgtgagaattaaatttctccgcaacaagccagatcat
gcactcgttcagatggttgatgggttccaggctgaattagctgtgcacttcttgaaggga
gccatgctgtttggaaagcgattggaggtgaacttctcgaagcatactaacataacatca
gctcctgacacacacgaatatttgaactcaaacctcaaccgcttcaaccgaaatgctgca
aagaactaccgttactgctgctcccccaccaagatgattcacttgtctactcttccccag
gacatcacagaggaggagatcatggctcacctagaggaacatggaaacattgtcaacacc
aagctgtttgaggtcaatggaaagaagcaggcccttgtcctgtttgagacagaggagcag
gctacagaggcgcttgtgtgtaaacatgccactaccgttgacgggtcggttatccggatc
tccttctcccagttgcaaaccatatga
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