Telopea speciosissima (New South Wales waratah): 122669365
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Entry
122669365 CDS
T07910
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3 isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tss03041
]
122669365
03036 Chromosome and associated proteins [BR:
tss03036
]
122669365
Spliceosome [BR:
tss03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122669365
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
122669365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
UTP6_C
HAT_Syf1_CNRKL1_C
Lsm_interact
xRRM
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
122669365
NCBI-ProteinID:
XP_043722051
LinkDB
All DBs
Position
7:complement(20485079..20552230)
Genome browser
AA seq
835 aa
AA seq
DB search
MAETSDMEVKTLEKTHNEVEVDTEMENPSSSDSESESESESDDDVEDLRVEALEKELAEN
PSSYETHVQYIKSLRRLGHIEKLREARESMNALFPLTPAMWQEWVKDEASLSTGPETSVV
IEKLFERGLHEYLSVSLWCDCITYVQENDPSVHEYSPAGILKMRNLFERALTAAGLHVVE
GNKIWEAYRKFEQAFIHTIDDSDREGKEKQVNRIRGIFHRQLSLPLADLRSTLFAYKAWE
VEQGTAPEVDPGELDGVPSNVVSAYQKAIEMYNARVHHEEKICKQDASDMEKLQHYMTYL
KFEQSCGDPARIQILYERAITEFPLSSDIWLDYTRFLDHTLKVPSVARDVYSRAIRNCSW
IGELWSRYLLSLERGHASKNELSAVFEQSLQCTFSSIEEYLDLYLTRIDGLRRRISLTGP
ADDALDYALIRDTFQHAADYLSQYLKAEGGLLHNLHLHAYWARLELKFANDPVAARGVWE
SLLKTSSSMIEAWKGYIGMEIEMGHIHEARSIYRRCYSKRFNGTGSEDICHSWLRFEREY
GTLGDFDHALRKVTPRLEELKLFISQQQATHLAAPATQKERAPAKNLSQKRGSSARLTDE
QNPPKRQKGVFQKDSTQKSGTKKDRLNEVKANKPENSDEQQVNDSGAGKTKLYSDECTVF
ISNLGLEANEGHLRDFFSDIGGVTDIRILKDKFTRKSRGLAYVDFSDSTQLGAAVLKNRQ
TLLGKKLSIARSDPKRSQKKVSFGASTAPDHGMGAGHEEPIAASKESTGPHKSSSVSKRR
EDRVQLKGKNTFAVPRNLVRPLGWSKNEQTSEEDEKPKSNDEFRDMLLKSNKVDK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacctctgatatggaagtgaagaccctcgagaaaactcacaatgaagtggaa
gttgatacagaaatggaaaaccctagttcttccgattcggagtcggagtcggaatcggag
tcggacgatgacgtcgaagatctccgagtggaagccctagagaaagaactggcggagaac
ccgtcgagttacgagactcacgttcaatacataaaatctctgaggagactcggccatatt
gaaaagctacgtgaagcaagagagtcgatgaatgctcttttccctttaacccctgcaatg
tggcaggagtgggtcaaggatgaagcctcactgagcactggacccgagacttctgttgta
attgaaaaactttttgagcgaggtctacatgaatatctgtctgtgtctctatggtgtgac
tgcataacttatgtacaagagaatgacccatcagtccatgaatattcgccagctggtatc
ttgaaaatgaggaacttatttgaacgtgctcttactgctgctggattgcatgttgttgaa
ggcaataagatctgggaagcatacagaaaatttgaacaagctttcattcatactattgat
gatagtgatcgagagggaaaagaaaagcaggtcaatcgaattcgaggtatattccatcgt
cagttatctttgcctctggctgacttaaggtcaacactttttgcctacaaggcttgggag
gttgaacaagggactgctcctgaagttgatcctggtgagctggatggagttccttctaat
gttgtttcagcatatcaaaaggccattgagatgtataatgctcgggtccatcacgaagaa
aaaatttgtaagcaagatgcatcagacatggagaagcttcaacattacatgacatactta
aaatttgaacagtcatgcggtgatccagctcgcattcaaatcctgtatgaacgtgccatc
acagagtttcctttatcaagtgacatatggcttgattatactcgctttttggatcacaca
ttaaaggttcccagtgttgctagggatgtatattccagggcaatcagaaactgctcctgg
attggagagctttggagtcgatatttgctctccttggagcgtggtcatgcttctaaaaat
gagttgtctgctgtctttgagcagtccctgcaatgtactttttcgagcatcgaagagtat
ttggatttataccttactcggatagatggtttacgacgaaggatttcattaactggtccg
gcagatgatgctctcgactatgccttgataagggacacatttcagcatgctgcggattac
ctctcccaatacttaaaggctgaaggtggtttgttacataatttgcatttgcatgcttat
tgggctcgtttagaattaaagtttgcaaatgatccagttgcagctcggggagtttgggag
agcctacttaagaccagtagttcaatgatcgaggcctggaaaggttatataggaatggaa
attgaaatgggtcatatccacgaagctagatctatctacaggagatgctacagtaaaaga
ttcaatggaactggttcagaggacatatgccattcttggttacgctttgagcgggagtat
ggtactctgggagattttgaccatgctttaaggaaggtgactccacgccttgaagagctt
aagttattcatatcacaacaacaggccacacatcttgctgcaccagcaactcagaaagag
agagcccctgcaaaaaatctctcacaaaaaagaggatcaagcgcaagattaacagatgaa
cagaatccaccgaagaggcagaagggagtttttcagaaggattcaactcagaagtcaggt
acaaagaaagataggctcaatgaagtcaaggctaacaaacctgaaaactcagatgagcaa
caagtcaatgattccggagctgggaaaacaaaattgtacagtgatgagtgcactgtgttt
atttcaaatcttggcttggaggcaaatgaaggacatctgcgtgatttctttagcgacatt
ggtggagtcacagatattcggatcttgaaggacaagttcactcgcaagtcaaggggtctg
gcctatgtggatttttcggatagcacacaacttggagcagctgtgttaaagaacagacag
acactgcttggtaagaaattgagcattgcacggtcagatccaaaacgaagccaaaagaag
gtttcctttggagctagcactgcaccggatcatggtatgggtgcaggacatgaagaacct
attgcagcctctaaagagtctactggacctcataagtcatcttcagtttccaaaaggcgt
gaagaccgagtccagctcaaggggaagaacacatttgcggtgccaaggaatttggttaga
cccctgggatggagtaagaatgaacagacgagtgaggaggatgagaagccaaaatctaat
gatgagttcagggatatgttgctcaaatccaacaaggttgacaagtag
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integrated database retrieval system
