Telopea speciosissima (New South Wales waratah): 122669455
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Entry
122669455 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122669455
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122669455
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
122669455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
DUF6836
zf-RING_16
zf-RING_4
zf-RING-like
zf-HC5HC2H
FANCL_C
SLX1_C
Prok-RING_1
Prok-RING_4
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
122669455
NCBI-ProteinID:
XP_043722156
LinkDB
All DBs
Position
7:complement(56547894..56549253)
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AA seq
431 aa
AA seq
DB search
MSTGFRPSFAVIIGVVAIMFSLTFLLLIYAKYCRRTPSSEFTIDDVDQRRFGFGFSLGEL
RAASSRRFSGIDKTVIESLPFFRFSSLKGAREGLECAVCLSKFEDTEILRLVPKCKHAFH
IDCVDRWLESHSSCPLCRHQVDPSDLTIFTYSNSLRISRNPSDLTDDPNLELFVRREQNN
DNNQVGSSSSRFSIGGSFRKIEIDKKGEELPIQEEQHVIIDGEDAGDGDDDDRKLLHKFK
HMIIVSDVVCKNRWSDVNSSDLMLLNSEMLRVMSSRRFQSSASSNERFTPATASSDNGSS
SNSTDQIILKIKEEMERKRVFESKLNNYSFSNSKVPSTPVSESTSELNRNNPRGPLILSG
TRSVSETSFSRFPDHIEKNRRIKESFHRSGKDERIRKVWIPIARRTVQWFAGREQRSQQQ
SHSQSQQTSNV
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggggttccgcccaagcttcgccgtcatcataggcgtcgtagccattatgttc
tccttaacctttcttctcctcatctacgccaagtactgtcgcagaaccccctcgtccgaa
tttaccatcgacgatgttgaccaacgccgctttggttttggttttagtcttggggaactc
cgggcagcaagctctcggcgcttctctggaatcgacaagacggtgattgagtcactccct
ttcttccgcttctcttctttgaaaggagcgagagaaggcctcgagtgcgctgtctgcctc
tccaagttcgaagacaccgagatcctgagattggtgcctaagtgcaagcacgcctttcac
atcgactgcgtcgatcgatggctcgaaagccactctagctgtcccctctgtaggcatcag
gtcgacccttctgacctcaccatcttcacctattccaacagtttgagaatctctcggaac
ccttcggatctcactgatgacccaaatctcgagctctttgtccgtagggagcaaaacaat
gataataatcaagtgggttcgtcgtcttcaaggttcagcatcggaggtagctttaggaag
atcgaaatagacaagaaaggggaagaactgccaatccaagaagaacaacacgtcatcatc
gacggcgaagatgctggcgatggtgatgatgatgaccgtaagttgctgcataaattcaag
cacatgatcatcgtctccgacgtcgtctgcaagaacagatggagcgacgtcaactcttct
gatctcatgttgttgaattcggagatgctgagagtgatgtcgagcaggagattccaatct
tctgcttcgagcaacgagcgattcactcctgcaacggcatcatccgataatgggtcttca
tctaactcaactgatcagataattttgaagattaaggaggagatggagaggaagagggtg
ttcgagagtaagctcaataactattcgttttccaattcaaaagtcccttctactcctgtt
tcggagtcgacatcggaattgaatcggaataatccgcggggtccattgattctatcgggg
acaagatccgtctcagagactagcttctctagatttcccgatcacattgagaagaacaga
agaattaaagagtctttccatcgtagcggaaaagacgagagaataaggaaggtttggatt
ccaattgctagacgaacggttcaatggtttgcaggtcgagagcaaaggtcgcagcagcaa
tctcattctcaatctcagcagacatctaacgtatag
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