Telopea speciosissima (New South Wales waratah): 122669886
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Entry
122669886 CDS
T07910
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122669886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tss03400
]
122669886
Enzymes [BR:
tss01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
122669886
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
122669886
DNA repair and recombination proteins [BR:
tss03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122669886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
NFACT_N
Motif
Other DBs
NCBI-GeneID:
122669886
NCBI-ProteinID:
XP_043722699
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All DBs
Position
7:complement(22203359..22218090)
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AA seq
394 aa
AA seq
DB search
MPELPEVEAARRAIETHCLGKKIKSSIVADDPKVIDGVSPSDFQASLLGKTIVAAHRKGK
NMWLELDSPPFPSFQFGMAGALYIKGVAIAKYVRSAVNDTDEWPSKYSKLFMELEDGLEL
SFTDKRRFAKVRLLKDPKSVPPISELGPDALYELMPVDEFAESLSKKKIAIKALLLDQSY
ISGIGNWIADEVLYQSRIHPLQHSFSLSKESCETLHKCIKELILQVIEKALEVGADSSQF
PSSWIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLTGKKTGKAPSRSTKQSSD
KDENGDGEDEDELGSNKETTEKAKSKKGQKTSRGAAMKPPVKRSKESGSDDDGDDGEEKK
TTKMSKTQKTKVETSQKKLKNSNTSAHLKKKAKK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcttcccgaagttgaagcggcgagaagagcaatcgagacgcattgtttgggc
aagaagatcaaaagttccatcgtcgcggacgacccaaaggtcatcgatggcgtctctccc
tcagacttccaagcctctctgctcggcaaaactatcgttgctgctcatagaaagggcaag
aacatgtggcttgagctcgattctcctccatttccttcattccagtttggaatggctggt
gctttatatattaaaggggttgcaatagcgaaatatgtgaggtctgcagtaaatgacact
gatgagtggccttccaaatattccaagttatttatggaattagaagatggtttagagcta
tcttttaccgataagaggcggtttgcaaaagttcgcttgcttaaagatccaaaatcagtg
cccccaatatctgaacttggtcctgatgcactctatgagcttatgcctgtagatgagttt
gctgaatccttgagcaaaaagaagattgcaattaaggctttattacttgatcagagttac
atttcgggcattggcaattggatcgctgatgaagttctctatcaatcaagaattcatcct
ctgcaacattctttcagcttgtcaaaagagagctgtgagactcttcacaagtgcatcaaa
gagttgattttacaggtcattgaaaaagccctggaggttggagcagatagtagtcagttt
cctagtagttggatttttcattctcgtgaaaagaaacctggcaaggcatttgttgatggg
aagaaaattgatttcatcactgcaggaggcaggacaacagcctatgtgccggagctgcaa
aaactaacaggaaagaaaacagggaaggctcctagtagatccacaaagcagtcttctgac
aaagatgaaaatggagacggtgaggatgaggacgagctaggaagtaacaaggaaacaact
gaaaaagccaagtccaagaaaggccagaagacaagtagaggtgcagcaatgaagcctcct
gtgaagagatccaaagaaagtggtagcgatgacgatggagatgatggtgaagagaaaaaa
acaaccaagatgtctaagacccaaaaaacaaaggtggagacatctcaaaagaaactcaag
aacagcaatacgagtgcacacttaaagaagaaagcaaagaagtag
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