Telopea speciosissima (New South Wales waratah): 122670110
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Entry
122670110 CDS
T07910
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03015
mRNA surveillance pathway
tss04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122670110
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122670110
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tss01009
]
122670110
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122670110
03036 Chromosome and associated proteins [BR:
tss03036
]
122670110
Protein phosphatases and associated proteins [BR:
tss01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122670110
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122670110
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122670110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
HEAT_EZ
Htt_N-HEAT_1
PDS5
Vac14_Fab1_bd
Adaptin_N
TOR1L1_N
RTP1_C1
TAF6_C
Cnd1
CLASP_N
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
122670110
NCBI-ProteinID:
XP_043723014
LinkDB
All DBs
Position
1:56552407..56609054
Genome browser
AA seq
587 aa
AA seq
DB search
MAMIDEPLYPIAILIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGLEYAHVLLPPLETLCTVEETCVRDKAVDSLCRIGAQMKES
DLVDWFIPLLKRLASGEWFTARVSSCGLFHIAYPSAPEMLKTELRQIYSQLCQDDMPMVR
RSAASNLGKFAATVEPAHLKTDIMSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPEDCVS
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRSDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPQLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLEDKVYSIRDAAANNLKRLAEEFGPDWAMQHIIPQV
LDMINNPHYLYRMTILHAISLLAPVMGAEIICSKLLPVVIYASKDRVPNIKFNIAKVLQS
LIPIVDHSVVEQTIRPCLVDLSEDPDVDVRLFASQALQASDQVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatgatcgacgagccactgtatccgattgctattttgatagacgagctaaaaaat
gaagatattcagcttcgcttgaactctatccgtaggctttctactatagctcgtgctttg
ggtgaggaaagaacgaggaaggagttgattccttttctaagtgagaacaatgatgatgat
gacgaagtactccttgcgatggctgaggagctcggggtgttcattccttatgttggcgga
ttggaatacgctcatgttttgttacctccattggaaactctttgtactgttgaggaaacc
tgtgtgagagacaaagcagtggattcgttgtgtcggattggagctcagatgaaggagagt
gatttggtagattggtttattcctttgctgaagagactggcatctggtgagtggtttaca
gctcgggtttcttcatgcggactgtttcatattgcttacccaagtgcccctgagatgtta
aagacagaattacggcaaatatacagccaattatgtcaagatgacatgccaatggtgagg
agatctgctgcatcaaacctgggaaagtttgctgctactgttgagccagcccatctgaag
actgatatcatgtcaatatttgaggatttgactcaggatgatcaagattctgttagactt
ttggctgttgagggatgtgcagcacttggaaagttgttggaacccgaggactgtgtttct
cacatccttcctgtcattgttaatttctctcaggataagtcttggcgagtgcgatacatg
gtagctaatcagttgtatgaactttgtgaagctgtggggcctgagcctaccaggtcggac
ctggttcctgcatatgtgcggctacttcgagataatgaggctgaagtacgtattgcagct
gcaggaaaagtaaccaagttctgccgaatattgaatccccagctagcaattcaacatatc
cttccttgtgtgaaggaactctcatcagattcttcccagcatgttcggtctgctttagct
tcagtgataatgggaatggcacctgttttaggaaaggatgcaacaattgagcaacttctt
ccgatttttctatcccttctaaaagatgaattccctgatgtccgacttaatattattagc
aagcttgatcaagtgaatcaggtgattggaattgatctgttatcccaatcattgctacca
gccattgttgagcttgctgaggatagacattggagggttcgccttgcaataatagagtac
atacctttattggcaagtcagttgggtgtggggttttttgatgataagcttggtgctctt
tgcatgcagtggttggaagataaggtttactcgattcgtgatgctgctgctaataacttg
aagcgtcttgcggaagaatttggcccagattgggcaatgcagcacataattcctcaggtt
ttagacatgattaacaacccacattatctgtatcggatgaccattctacatgcaatttct
ctactcgccccagtaatgggtgcagaaatcatatgttcaaagttgctaccggttgtcatt
tatgcatcaaaagacagggtacccaacatcaaatttaatattgcaaaggtgttgcagtcc
ctcattcctattgttgaccattctgtcgtagagcagacaattcgtccctgtttggtggac
ctcagtgaggacccagatgtagatgtcagactttttgctagccaagctcttcaggcgagt
gatcaagttatgatgtccagctag
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