Telopea speciosissima (New South Wales waratah): 122670140
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Entry
122670140 CDS
T07910
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase isoform X1
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00240
Pyrimidine metabolism
tss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
122670140
Enzymes [BR:
tss01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
122670140
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
122670140
NCBI-ProteinID:
XP_043723052
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Position
7:44288219..44345401
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AA seq
366 aa
AA seq
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MVIIHSRRLAYCLPYQFLASTDMASSAFSRLLNLQGHFQQMKQGGRDGNGRWHVRVSPDV
SDALMCGSAVVALESTIISHGMPYPQNLQTAKEVEAIVRENGAVPATMAILDGIPCIGLT
SEELEKLAKLGTKAQKTARRDIAYVVATRGNGATTVSSTMFFSSMVGIPVFVTGGIGGVH
RNGENTMDISSDLTELGRTPVAVISAGVKSILDIPRTLEYLETQGVTVAAYKTNEFPAFF
TETSGCKVPCHVDSPEDCAELIDANMKLGLGTGILIAVPIPKEHAASGNLIESAIQRALK
EARDKNVTGNAETPFLLAKVNELTGGASLVANIALVKNNALVGAKTAVALAKLRKNSNYG
NAESAS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggtcataatccacagccggagactcgcgtactgccttccctaccagttcttagcctct
acagacatggcgtcttcagccttctcgaggttgcttaatcttcaaggacattttcaacaa
atgaagcagggtgggagagatggcaatggcagatggcatgtgagggtatctccagatgtg
tctgatgccctgatgtgtgggagtgcagttgttgctctagaatccactattatttcacat
ggaatgccctaccctcagaaccttcagactgcaaaggaggtggaggcaattgttagggag
aatggagctgttccagccacaatggccattttagatgggataccatgcataggtctgact
agtgaagaactagagaagcttgcaaagcttggcactaaggctcaaaagacagctcgtagg
gatattgcatatgttgtggctaccagaggaaatggtgcaacaactgtttcttccaccatg
tttttttcttcaatggttggcatccctgtgtttgttactgggggaattggaggagtgcat
agaaatggtgaaaatacaatggatatatcttctgatcttactgagcttggacgaactcca
gtagcagttatctctgctggtgtcaagtcaattttagatatcccaagaacacttgagtac
ttggaaactcaaggagttacagttgctgcgtataagacaaacgagtttccagcctttttc
actgaaacaagtggctgcaaggttccttgccatgtggattcccctgaagactgtgctgag
ctcatagatgcaaacatgaaacttgggcttggaactggtattttgatagctgtgccaatc
ccaaaagaacatgcagcatcaggaaacttgattgagtctgcaatacagagggcccttaaa
gaagcaagggataaaaatgtgactggcaatgcagaaactccattcttgcttgcaaaagtg
aacgaactcactggaggagcctctctggttgcaaacattgcacttgtgaagaacaatgcc
cttgttggtgcaaagactgctgtagctcttgctaagctcagaaagaacagtaattacggt
aatgctgagtcagcatcataa
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