KEGG   Telopea speciosissima (New South Wales waratah): 122670148
Entry
122670148         CDS       T07910                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122670148
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tss03019]
    122670148
   03041 Spliceosome [BR:tss03041]
    122670148
Messenger RNA biogenesis [BR:tss03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122670148
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122670148
Spliceosome [BR:tss03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    122670148
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 Nop14
Other DBs
NCBI-GeneID: 122670148
NCBI-ProteinID: XP_043723066
LinkDB
Position
7:21825243..21878631
AA seq 524 aa
MAKKRKLECKPEPEPEPEPETATVETVEEEQQQQLEQEEQVPFEVDEEEEQVDTGDAEVA
EEEDEEEDEEVDEEVDPEEDGEEEEEAEAAKEGDVQNPSNLTASSTAVAASSAPWTAANT
TADDDDDGEEPVQNLLEPFNKEQLVDLLREATENHPDVLDRIRKLADVDPVHRKVFVHGL
GWDTNAETLISAFKQYGEIEDCNAVCDKISGKSKGYGFILFKHRSGARKALRQPQKRIGN
RMTACQLASAGPIPPPAPAAPPVSEYTLRKIYVSNVSADIDPQRLLNFFAKYGEIEEGPL
GLDKQTGKPKGFSLFVYKTVESAKKALEDPQKNFEGHILHCQKAIDGPKPNKQYYHHHNT
HHPQHGSHYQRNENPNFMGAMGSHGSAVPTPGHMMAPSPAGVPFNQAATQALNPALGQAI
TALLATQGAGLGLTNLLGTLGSTGVGPQVNQNVPQMLNNTSHGMQGGYGSQSVANNISPG
VMGGYGNQSAMQGGYPNAPMGQGNAGRSQQGVGHMGGVAPYMGH
NT seq 1575 nt   +upstreamnt  +downstreamnt
atggcgaaaaagcgaaagctcgaatgcaaacctgaaccagagccagagccagagccagag
acagcaaccgtagaaaccgtagaagaagaacagcagcaacaactagagcaagaagaacaa
gtccccttcgaggttgatgaagaagaagaacaagtagacaccggcgacgcagaggtcgcc
gaagaagaagatgaagaagaagacgaagaagtagacgaagaagtagacccagaagaagac
ggagaagaagaagaagaagcagaagcagcgaaggagggagatgttcaaaacccctcaaac
cttacagcatcatcgacggctgtagcagcttcttctgcaccatggactgctgctaatacc
actgcagatgatgacgacgatggagaagaacctgtgcagaatcttctggaaccattcaac
aaggagcaactggttgatctcctccgtgaagctactgagaatcatccagacgtgctggat
cgaatccgcaagcttgccgatgtggatcctgttcatcgcaaggtctttgtacatggtctt
ggttgggataccaatgcagaaaccctaatcagtgctttcaagcagtacggtgagatcgag
gattgtaatgccgtctgtgataagatttctgggaaatccaagggttatgggttcatcctc
ttcaagcaccgaagtggggctcgtaaagccctaagacagccacagaagcggatcggtaat
cggatgacggcctgccagttggcctctgccgggccgattccgccacccgcaccggctgca
ccgccggtttcagagtacacactgaggaagatctatgttagcaatgtatcagctgatatc
gatcctcaaaggttgcttaatttctttgctaagtacggggaaattgaggagggaccgtta
gggttagacaagcagactggcaagcctaaggggttttcgctgttcgtttacaagacagtt
gagagtgcgaagaaggcattggaagatccacagaagaattttgaaggtcatatcttgcac
tgtcagaaggcaatcgatgggccgaagccaaacaagcagtactaccatcatcataacaca
caccaccctcagcatggctcacattatcagagaaatgaaaaccctaattttatgggggct
atggggagccatggttctgctgtgccgacgcctggtcacatgatggccccaagcccggct
ggggtgccattcaaccaagcagctacacaggcgttgaacccggctctaggacaggcaata
acggcattgcttgcaacccagggtgctgggttagggctgacgaatttgttgggaacactt
gggtcgactggagtggggccacaggttaaccaaaatgtgcctcagatgttgaacaacact
agccatggaatgcagggtgggtatgggagtcagtctgttgcgaataatatcagtcctggt
gtgatggggggatatgggaaccagtctgctatgcaaggaggatatccgaacgcgcctatg
ggacagggcaatgctggtagatcacagcaaggtgtgggccacatgggtggagttgcgcct
tacatgggtcattag

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