Telopea speciosissima (New South Wales waratah): 122670444
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Entry
122670444 CDS
T07910
Name
(RefSeq) protein JOKA2-like
KO
K17987
next to BRCA1 gene 1 protein
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122670444
03029 Mitochondrial biogenesis [BR:
tss03029
]
122670444
Membrane trafficking [BR:
tss04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
122670444
Pexophagy
Other pexophagy associated proteins
122670444
Aggrephagy
Cargo receptors
122670444
Xenophagy
122670444
Other autophagy associated proteins
Midbophagy
122670444
Mitochondrial biogenesis [BR:
tss03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
122670444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_NBR1_C
N_BRCA1_IG
PB1
ZZ
Motif
Other DBs
NCBI-GeneID:
122670444
NCBI-ProteinID:
XP_043723255
LinkDB
All DBs
Position
8:13806460..13812322
Genome browser
AA seq
822 aa
AA seq
DB search
MPDLVIKVKYGDTLRRFSVFVQEDGSVDLNMALLTAKIFNLIKFAPDADLNLTYIDEDQD
SVTLVDDDDLHDAFRQCLNPLRINILRNGTGNGRYDTKSSGSSTPKRSPFIQGPSFANIN
SAITEVMKPVPEPFHDVLSKLSYDLAAKAASSVPLMTELVECLSKLGLNNLNSVSQCNDD
AHSSTQGVAAENPVGFRVAEDLESLNKSAHVQIAKVSNANLADDKKECDSCNITRGVGTS
VPKPATSVDLNLDPRDSIASGFSATGFTVPAALGHNDISGKGKDIQNEHIGNLSGKPVAF
RSAFYTLPDHQVHISPHPSQASNTAKLPLSAINTQGGSSVLGGDNNNKQLPTGFRHSSVS
QVGFNPQSKCPFRGESGVESSDVVPSGGYYRYHPSKRSGRIFHKGVRCDGCFVYPITGPR
FKSKMKEDYDLCSICYSEMGNKDEYIRMDRPMPFRSPRLFKKLYDPRHRFPEPSLPHMMQ
VCKVKPCRQKLDSCFVEDVNVIDGTMMAPETQFTKIWRMRNNGTIAWPRGTHLVWIGGDQ
FSDKVLVELEIPVDGIPVDKELDVAVDFRAPQLPNGYVSYWRMASPSGQKFGQQVWVLIK
VDASSQEGSIASSFHGLNLNLPPECSGAKGTEIIDVNVEPADSSSLGTGRSTVEMELVRP
VLDKHPSKDQALEFPVNDSLLVGSWVFGPVNPGIPASVSYPIIDISEGLSEPFSLMDMET
SAGESEAEVEKTLLKELEEMGFKQIDFNKEILRMNEYNMEQSVDYLCGVAEWDPILEQLQ
EMGFCDRETNKKLLIKNGGSIKRVVMDLIAGESRVETSPPAF
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatttagtgatcaaggtgaagtatggggatacacttcgacgcttttctgtgttc
gttcaggaagatggctccgtggatctcaacatggccctattgacggcaaagatctttaat
ctcattaagtttgctcctgatgctgatcttaacctcacatatattgatgaagaccaagat
agtgtaacacttgttgatgatgatgacctgcatgatgcctttaggcagtgtctcaatccg
ctgagaataaatatattgcggaatggtactggaaatggaagatatgacacaaaatctagt
ggaagttcaacccctaagagatcacccttcatccagggaccttcattcgcaaacatcaat
tctgctattactgaagtcatgaaacctgtaccagagccattccatgatgtactctcaaag
ctctcttatgatttggctgcaaaggctgcatcctctgttccactgatgactgagcttgtt
gagtgcttgtcaaagttaggactcaataacctgaattcagtttcccagtgtaatgatgat
gcacattcaagcacacagggtgtggctgctgagaaccctgttggcttcagagtggctgag
gatctggaatctttaaataaatcagcacatgttcagattgctaaagtttccaacgcaaac
ttagcagatgataaaaaagagtgtgacagttgtaatattaccagaggtgtggggacctca
gttcctaaacctgctacttctgtggatcttaatctggatccaagagattctatagcatca
ggattttcggctactggtttcactgttcctgcagctttgggacataatgatatcagtggc
aaaggaaaggacatccagaatgagcatattggtaatctcagtgggaagccagttgctttt
agaagcgcattttatacattacctgatcatcaggtgcatattagcccccatccatctcaa
gcttcaaacacagccaagctacctctctcagcaattaatacccaaggtggttcaagtgtc
ttgggtggagacaacaacaacaagcaacttcctactggttttcggcattcttctgtatca
caggttggtttcaatccccagagcaaatgcccattcaggggggagagtggagtggaatcc
tctgatgttgtgccttctggtgggtactatcgttatcacccatcaaaaaggagcggcaga
atcttccacaagggtgttaggtgcgatggttgttttgtgtatccaataacaggccctcgg
ttcaagtcgaaaatgaaagaagattatgacctgtgcagcatctgctactcagaaatgggc
aacaaggatgaatatattagaatggatcgtccaatgccattccggtctccacggttattt
aaaaagctctatgatcctcgccatcggtttccagaaccatcgttaccacacatgatgcaa
gtttgtaaggtgaaaccatgccgacaaaagcttgacagttgcttcgttgaagatgtgaat
gttatcgatggaactatgatggccccagaaacacaatttactaagatatggcgtatgcgg
aacaatggtactattgcttggccccgtggaacacatcttgtatggattgggggggaccag
ttcagtgataaagttttggtggagttggagattccagtggatggcatccctgtggataaa
gaacttgatgttgctgttgattttagagctcctcaactccccaatggttatgtgtcatac
tggaggatggcgtcaccatcaggccagaaattcgggcagcaagtttgggtcctcatcaag
gtagatgcttcttctcaagagggctcaattgctagtagttttcatggcttgaacttgaac
ttgccccccgaatgcagtggggcaaagggaaccgagatcattgatgtgaatgttgagccg
gcagatagtagctctctagggactggacgctctaccgttgagatggaattagtgaggcct
gtcttagacaaacacccaagcaaggatcaagcacttgagttccctgtaaatgacagctta
cttgttggcagttgggtttttggtcctgtcaatccaggaatacctgcttcagtatcttat
ccaatcattgatatctccgaagggctttctgaacctttttcattgatggatatggaaaca
tcagctggagagtctgaggctgaagttgaaaaaacccttctgaaggagcttgaagagatg
ggtttcaagcagattgacttcaacaaggaaatcttgaggatgaacgagtataacatggag
cagtctgttgattatctctgtggtgttgcagagtgggatccaatccttgagcagctgcag
gagatgggattctgcgacagagagacaaataagaagttgctgattaagaatggtggaagc
atcaagcgggttgtcatggatcttattgcaggagagagccgagtagaaacctctccacct
gccttttaa
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integrated database retrieval system
