Telopea speciosissima (New South Wales waratah): 122670545
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Entry
122670545 CDS
T07910
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122670545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122670545
Transcription machinery [BR:
tss03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
122670545
Prokaryotic type
Archaeal type
TFB
122670545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
zf_Tbcl_2
RB_B
Zn_ribbon_8
DmmA-like_C
A2L_zn_ribbon
DUF7573
zinc_ribbon_6
Motif
Other DBs
NCBI-GeneID:
122670545
NCBI-ProteinID:
XP_043723405
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All DBs
Position
8:complement(59730730..59735005)
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AA seq
312 aa
AA seq
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MADVYCSDCKKNTEVVFDHSAGDTVCSECGLVLEAHSIDETSEWRTFANESGDNDPVRVG
GPANPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLILAFKTIATMSDRLG
LVATIKDRANEIYKKVEDQKSIRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKLLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVKAAQEAVQKSEEL
DIRRSPISVAAAVIYMITQLSDDKKLLRDISLATGVAEGTIRNSYKDLYPYASRLIPNWY
AKEEDLRNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgtactgctccgattgcaagaaaaacacggaggtggtgttcgaccattcc
gccggcgatactgtttgttctgaatgcggcctcgttctcgaagctcattccatcgatgag
acctccgaatggagaaccttcgctaacgagtccggagacaacgatcctgttcgtgtcggt
ggccctgctaaccctcttcttaccgacggtggtctctctactgttatctccaagcccaac
ggtgcctctggtgacttcttatcttcttccctcggtcgatggcagaaccgcggctcgaat
cctgatcggtctctgatacttgccttcaaaaccatcgccaccatgtccgacaggctgggc
cttgtggcgacaattaaggaccgggccaatgagatatacaagaaggtggaggatcaaaaa
tctattagaggaagaaatcaggatgcaattttggctgcttgcctgtatattgcttgtcgc
caagaagacaagcctcgcactgtaaaggaaatttgctcggttgccaatggtgccacaaag
aaggaaattggccgggcaaaagagtacattgtgaaactactggaggtagagatgggtcaa
tcaatggagatgggaactattcatgctggagattttttgaggcgcttttgttctcatctg
ggcatgactaatcaagctgttaaagctgcccaagaagctgttcagaagtccgaagagctg
gacatcaggagaagccccatttcagtggcagcagctgttatttacatgattactcagctc
tcagatgataagaagcttcttagagatatttcgctcgcaactggagtagcggagggcacc
atcagaaattcgtataaagacctttatccatatgcttcccggttaataccaaactggtat
gcaaaggaggaggaccttaggaacctctgtagcccttga
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