Telopea speciosissima (New South Wales waratah): 122670663
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Entry
122670663 CDS
T07910
Name
(RefSeq) phytochrome B-like isoform X1
KO
K12121
phytochrome B
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
122670663
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_4
PAS_9
Motif
Other DBs
NCBI-GeneID:
122670663
NCBI-ProteinID:
XP_043723555
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Position
8:62266774..62295907
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AA seq
1124 aa
AA seq
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MASSSKATNAHQTHPLGGSSVKSHRGDSIIAQYNVDARLHAVFEQSGESGKSFDYSQSVK
TNNQFVPEQQISAYLSKIQRGGYIQSFGCMIAVDESTFRVVAYSENATEMLDLNPQSVPT
LEEPLTLTVGIDVRTLFTPSSSPLLEKAFRAREITLLNPLWIHSKSSNKPFYAILHRIDV
GIVIDLEPARTGNPALSVGGAVHSQKLAVRAFSRLQSLPGRDIKLLCDAVVEHVRELTGY
DRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPAIDIPQASRFLFKQNRVRMIVDCHAT
PVRVIQDEELLQPLCLVGSTLRAPHGCHSQYMANMGSIASLALAIIINGNDDEGISGRNS
MRLWGLVMCHHTSARCIPFPLRYACEFLMQAFGLQLNIELQLASQLAEKHVLRTQTLLCD
MLLRNSPTGIVTQSPSIMDLVKCDGAALYYRGKYYPLGVTPTEVQIMDITEWLLAHHGNS
TGLSTDSLADAGYPGAASLGDAVCGMAVAYITSKDFLFWFRSHTAKEIKWGGAKHHPKDK
DDGQRMHPRSSFKAFLEVVKSHSLPWENAEMDAIHSLQIILRDSFRDVEGRNSKAVANAQ
LGDLKSQVVNELNSVAREMVRLIETATAPFIAVDSHGRINGWNAKVAELTCLSVEEAMGK
SLVQDLIHKESEEVADKLLFHALRGEEDKNVEIKLRTFGSQHLKKAVFVVVNAFSSKDSM
GNIVGVCLVGQDVTGQKAVMDKFILLQGDYKAIVQSPNPLIPPIFASDENTCCLEWNTAM
EKLTGWGRGDIIGKMLAGEVFGNCCRFKSPDAMTKFMIVLHNAIGGQDTDKFPFAFFDRH
GKYVQALLTANKRVNIEGQIIGAFCFLQIASPELQLALEVQRHQEKKCFARMKELTYICQ
EIKNPLRGIRFASSMLETTDLTEDQKQFLETSACCEKQMLKIITDVDLESIEDGYLELDK
AEFLVGSVINAVVSQVMILLRKRGLQLIRDIPEDIQTLAVYGDQIRIQQVLVDFLLNMVR
YAPYPEGWVEIKVHPSLRLISDGIELVHLEFRIVCPGEGLPPQLVQDMFHSSQWVTHEGL
GLSMCRKILKLMNGELQYIRESEKCYFIIILELPMPWRGSNRAD
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagtagcaaagcaactaatgctcaccaaacccatcccttagggggaagcagc
gtcaaatcccaccgcggagactccattattgctcagtacaatgttgacgcccgcctccat
gccgtcttcgaacagtccggcgagtccggtaagtccttcgactattctcaatccgttaaa
accaataaccaatttgtccctgaacagcaaatctctgcatacttgtccaaaattcagagg
ggcggttatatacagtccttcggctgtatgattgccgtcgacgagtccacctttcgggtc
gttgcttacagcgagaacgccaccgaaatgctcgaccttaatccccagtcagtccccacc
ctcgaggaacctctgaccctcacggttggtattgatgtccgtacgcttttcaccccatcc
agctctcctctcctcgagaaagctttccgtgctcgggaaatcacgttattaaaccctctc
tggatccattccaagagttccaataaacccttttacgccatcttgcatagaattgatgtg
gggattgtaattgacttggagcctgcgagaactgggaacccagctctgtcggttggtggt
gctgtgcattcgcaaaagctcgccgtccgagccttctctcgtttgcagtcactccccggt
agggatatcaagcttctttgtgatgctgtggttgaacacgtgagggagctcaccggttat
gaccgggttatggtgtataagttccatgaggatgagcatggtgaggttgttgccgagagc
aaacgaccggacttggagccttatatcgggttacactaccctgcaattgacataccccag
gcctcgaggttcttgttcaagcagaaccgggtcaggatgatcgtcgactgccatgccact
cctgtccgggttattcaggatgaagagcttttgcagcctctgtgcttagttggttcaaca
cttcgggccccgcacgggtgccactcccagtacatggccaacatgggctcaatcgcctca
ttagctttggcaataattatcaatgggaatgatgatgagggtatttctggacgtaactct
atgagactttggggccttgttatgtgtcaccacacttctgctcgatgcatcccatttccc
ctccgttatgcctgtgaattcctcatgcaggcttttgggcttcaactgaacatagaattg
cagttagcatctcaattggcagagaaacatgttttgcggacccaaactcttctgtgtgac
atgcttctccggaattcccccactgggattgtcacccagagccccagcatcatggatctt
gtcaagtgtgatggagctgcactctactaccgagggaagtattacccacttggtgtcacc
cctactgaagtgcagataatggacatcaccgagtggttgttggctcatcatggaaactca
acaggtttgagcacagatagcttagctgatgccggataccctggagcagcctcccttggt
gatgcagtttgtggaatggctgtagcttatatcacttctaaagatttcttgttctggttc
cggtcgcatactgccaaagaaattaagtggggaggagcaaagcatcacccaaaggacaag
gatgatgggcagaggatgcacccgcgctcttcatttaaggcgttcttagaagtggttaag
agccatagtttgccatgggagaatgctgagatggatgcaattcactcgttacagattata
ctgcgagactcatttagagatgttgaggggagaaattctaaggctgtggccaacgcccag
cttggggatttgaaatcgcaagttgtaaatgagcttaactcagttgctcgagagatggtt
aggctgatagagactgcaactgccccttttattgcagtggattcccatggccgtataaat
ggttggaatgcaaaggttgcagagcttacatgtctttcagttgaggaagccatggggaag
tcactggttcaggaccttattcataaggaatctgaagaggttgccgacaagctgctattt
catgctttaagaggtgaagaagataaaaatgtagaaataaagctcaggacttttggctcg
caacaccttaaaaaggctgtctttgtagttgtcaatgccttctctagcaaggattccatg
ggtaacattgttggggtttgcttggttggtcaggatgtcactggtcagaaagcagtgatg
gacaaattcattctcttgcaaggtgattacaaagctattgtacaaagccccaatcctctg
ataccacctatatttgcatcagatgagaatacctgttgcttagaatggaatacagccatg
gaaaagctcactgggtggggaagaggggacattattgggaagatgttggcaggggaggtt
tttggcaattgctgccggtttaagagcccagatgctatgactaaatttatgattgtgctg
cacaatgcaattggcgggcaagatacagacaagtttccgtttgccttctttgaccggcat
gggaaatatgtgcaggccctcttgacagcaaataagagggttaatattgagggccagatt
attggtgcattctgtttcttgcagattgcaagcccagaactgcaactggctctggaagtg
cagaggcatcaagagaagaaatgctttgcaaggatgaaagagttgacctacatctgccag
gaaataaagaatcctctgcgtgggatacggtttgctagttcaatgttggagactacagac
ttaacagaggatcagaagcagtttcttgagacaagtgcttgctgtgagaaacagatgctg
aaaataattacggatgttgacctggaaagcattgaagatggttatttggagcttgacaaa
gctgaatttctagttgggagtgttataaatgctgttgttagccaagtgatgatcctgctg
agaaagagaggtttacagttgatccgggacattccagaggacatccaaacactggctgtt
tatggtgatcaaataagaattcagcaagtcttggttgatttcttgttgaatatggtgcgg
tatgcgccatatccagaaggttgggtagaaattaaagttcatcctagtttgaggctgatc
tcagatggaatagagcttgtgcatcttgagttcaggattgtgtgcccaggggaaggcctt
cctccacaacttgtccaagatatgttccatagcagccagtgggtaacccatgaaggcttg
ggcctgagcatgtgcaggaagattctaaagctaatgaatggtgaactccaatatatcagg
gagtctgaaaaatgttacttcatcataatccttgaacttcccatgccttggagaggttcc
aatagggctgactag
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