Telopea speciosissima (New South Wales waratah): 122670668
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Entry
122670668 CDS
T07910
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tss03400
]
122670668
Enzymes [BR:
tss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
122670668
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
122670668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
T2SSE
AAA_19
DEXQc_Suv3
Tc-R-P
Motif
Other DBs
NCBI-GeneID:
122670668
NCBI-ProteinID:
XP_043723563
LinkDB
All DBs
Position
8:complement(18497065..18675501)
Genome browser
AA seq
2075 aa
AA seq
DB search
MLIQLPRLTNSLRHPYDVDQAYLQRRIILQNQKPHKPGNSLDDSELAKKIVRRWGEASNE
VRQAYKQFIGAVLELIDGEVVSEEFRELASTAYVLFSNPGEDWDDISRITVKKEELQQLL
GYTVSDINIRNVATMTQRLSALQPCEQEIEREMDKNLIEFGSDLVFNAPARFLVDVPSEN
GELLDYELPSTSSSVPEEWHDNNESTYPHSRVDRGTMNLRWLRDACEHIVRGYSSQLSVD
ELAMALCRVLDSDKPGDEIAGDLLDLVGDSAFETVQDLLLHRKELVDAIHHGLLMQKSEK
STSNLQPRMPSYGTQVTIQTESEKQIDKLRRKEEKRHRRGSEHGTENDLSVGDFSSLLKA
SEKKSPFDDLVGSGESLSVTSLPEGTVRKHCKGYLEVRIPPTPTAPMKPGEKLIEIKELD
DFAQAAFHGYKSLNRVQSRIFQATYHTNENILVCAPTGAGKTNIAMIAILHEIGQHFKDG
FLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNLAVRELTGDMQLSRKELEETQMIVTT
PEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQTMIRIV
GLSATLPNYLEVAQFLRVNPEAGLFFFDSSYRPVPLAQQYIGISEQNYAARNQLLNTICY
TKVIDSLKQGHQAMVFVHSRKDTVKTARTLIEIAQKEGELELLSTDTHPQFQLVKKEVQK
SRNKEVVEFFESGVGIHHAGMLRGDRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVI
KGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLTSQLP
IESQLISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMKSNPLAYGIGWDEVIADPS
LISKQRALVIDAARALDKAKMMRFDEKSGNFYCTELGRIASHYYIQYSSVETYNEMLRRH
MNDSEVINMVAHSAEFENIVVREEEQDELEKLIRTSCPLEVKGGPSNKHGKISILIQLYI
SRGSIESFSLISDAAYISANLARIMRALFEICLRRGWCEMASFMLEYCKAVDRQIWPHQH
PLRQFDRDLSAEILRKLEERGADLDRLMEMEEKEIGALVRYAPAGKLVKQYLVYFPWLNL
SANVSPITRTVLKVDLLIKPDFIWKDRFHGASLHWWILVEDSENDHIYHSEFFTLTKRMA
AGESQKLSFTVPIFEPHPPQYYIRAVSDSWLYAEAFHTISFQNLALPDAYTSHTELLDLK
PLPVTALGNRAYEDLYKFSHFNPIQTQTFHVLYHTENNVLLGAPTGSGKTISAELAMLHL
FNNQPDMKVIYIAPLKAIVRERMNDWRKRLVSQLGKKMVEMTGDFTPDLMALLSADIIIS
TPEKWDGISRNWHSRSYVMKVGLLILDEIHLLGADRGPILEVIVSRIRYISSQTERAVRF
VGLSTALANARDLADWLGVGDIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAY
AAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHSRQFLHMPEDALQMVLSQVTDQ
NLWHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTE
YYDGKAKRYVDFPITDILQMMGRAGRPQYDQHGKAAILVHEPKKSFYKKFLYEPFPVESS
LREHLHDHINAEIVSGTICHKEDAVHYLTWTYLFRRLVVNPAYYGLEDTETRTLNSYLSS
LVQNTFEDLEDSGCIKIDEDSVEPLMLGSIASQYYLSYLTVSMFGSNIGPDTSLEVFLLI
LSGASEYNELPVRHNEENYNEALSEKVRYLVDKNRLDDPHVKANILFQAHFSQLELPISD
YVTDLKSVLDQSIRIIQAMIDICANSGWLASALTCMHLLQMVMQGLWFDQDSSLWMLPCM
NAGLASTLSKEGISNVQQLLDLPEATLQVLVENFPASRLYQDLQLFPRVKVSLKLKRRDS
EDAKHVILNIKLVKTNSKYTTSRAFAPRFPKLKEEAWWLVLGNVSTFELYALKRVSFSGS
LVTHMDLPSTAINLPVSICFSFPSHTFYCWLALLI
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atgctgattcagttgcctcgtttgacgaattctttgaggcatccctacgatgtcgatcag
gcctatctgcaacgcagaatcattctccaaaatcagaaacctcacaaacctggaaactcg
ctcgatgattcagaactcgcgaagaagatagttcgtcgatggggagaagcctctaatgaa
gtgcgccaagcatacaaacaatttattggtgcggttttggagttgattgatggagaagtg
gtctcagaagaatttcgagaattggcgagtaccgcttatgttctcttcagcaatccagga
gaagattgggatgatattagtaggattaccgtgaagaaggaagaattgcagcaacttctt
ggatacactgtttcagatattaatatacggaacgttgctacaatgactcaaaggctttct
gctttgcagccttgtgaacaagagattgaaagggaaatggataaaaatttgatcgaattt
ggctctgaccttgttttcaatgcaccagctcggtttctggttgatgtaccttcggagaat
ggggagttgctagattacgaacttccttctacttctagttcagttcctgaggaatggcat
gataacaatgaatctacatatcctcattctcgagttgataggggaactatgaatttaaga
tggttaagggacgcatgtgagcatatagtaaggggatattcttcacagctttctgttgat
gaacttgcaatggcgctttgccgggtgcttgattcagacaagcctggtgatgagatagct
ggcgacttattggaccttgttggggatagtgcctttgaaacagttcaagatctcctgttg
catcgaaaggaacttgttgatgccatccatcatgggttgcttatgcaaaaatctgagaag
tcaacctcaaatcttcaaccccggatgcctagctatgggactcaggtcacaattcaaact
gaatccgagaagcaaattgataagcttcggcgcaaagaggaaaaacggcataggcgtggg
tcagaacatgggactgagaatgacttatctgtgggagatttttcttctttactcaaagca
agtgagaaaaaaagtccttttgatgatttggttggaagtggtgaatccttgtcagttact
tctcttcctgagggaactgtgaggaagcactgtaaggggtatctggaagtccgtattcct
cctacaccaacagcaccaatgaaacctggggagaaactgattgagataaaagagttagat
gactttgctcaggctgctttccatggttacaaatctctgaaccgggttcagagccggata
ttccaagcaacttatcacactaatgagaatatactggtttgtgctccaacgggagctggc
aagacaaatatagctatgattgccattctgcatgagattgggcagcactttaaggatggg
tttttacataaagatgaatttaaaatagtttatgttgctcctatgaaggcactcgctgct
gaggtcacatcgacatttagccatcgtttatctccgttgaatttggctgtgagagagctt
actggagatatgcaactttctaggaaagaactagaggaaactcagatgatagttacaact
ccagagaaatgggatgtgatcactcgcaaaagcagtgatatgtcgctgtcgatgctagtg
aaactattgattattgatgaggtacatctgttgaatgatgacagaggccccgtgatagag
gcattggttgctcggaccctccgccaggttgagtcaacacagactatgatacgcattgtg
ggcttgtcagctactctacccaattatttggaggtagcacaatttttgagggtgaatcct
gaagcgggactcttcttcttcgattctagctaccgtccagtacctcttgcacagcagtat
attggaatcagtgagcagaattacgctgctcgtaaccagctactcaatacgatatgttat
actaaggttattgattcattgaagcaaggccatcaggcaatggtttttgttcattcaaga
aaggacacagtaaaaacagcaaggacactgattgaaattgcccaaaaagagggtgaattg
gaattacttagcactgatacacatccacagtttcaacttgtgaagaaagaagtgcagaaa
tcccgaaacaaagaagttgttgaattttttgaatctggggttggtattcaccatgcaggg
atgttacgtggtgacagaggcctgactgagcgccttttctctgatggtctcctgaaggtt
cttgtttgcacggcaactttggcatggggagtaaatctaccagcccatacagtcgtcata
aaggggacgcaattgtatgacccaaaggctggtggatggcgagacctaggaatgcttgat
gtaatgcagatctttggaagagctgggagacctcagttcgataaaagtggtgaaggcatt
atcatcacttcacatgacaagctggcctactatttgcggctgctgacgagtcaactaccc
atagaaagtcagttaattagctctttgaaggataatttgaatgcagaggttgcattgggt
actgtcacgaatgttaaggaagcttgtgcttggcttggctatacatatcttttcatcagg
atgaagtcaaatcctttggcatatggaataggatgggatgaggtcattgcagatccctct
ttaatatcaaagcagagagcacttgtaattgatgctgcacgtgcacttgacaaagcaaaa
atgatgcggtttgatgagaaaagtggcaatttctactgtactgagcttggccgcattgct
agccattattatattcagtactccagtgttgaaacttacaatgaaatgctaaggcgtcac
atgaatgacagtgaggtaattaatatggttgctcattctgctgagtttgaaaatattgtt
gtaagagaagaggagcaggatgagctagaaaagttaattcgtacctcatgtccactagaa
gttaagggtggtccttcgaataaacatggaaaaatttcaatcctcattcagttatacata
tcacgaggatcgatcgagagcttctctttaatttctgatgcagcatatataagtgcaaac
ttggcccgcataatgcgggctttatttgaaatttgtctgcggagagggtggtgtgagatg
gcttctttcatgttggaatactgcaaagctgtggaccgccaaatttggccacatcaacat
cccctcagacagtttgatagggatctttcagctgaaatactgaggaagcttgaagaacga
ggagctgacttggatcgccttatggaaatggaggaaaaagaaattggagcgctagttcgc
tatgcacctgctggaaaattggtaaagcaatatttggtatatttcccatggctcaatttg
tcagcaaatgtaagtccgatcacaagaactgttcttaaggtggatttgcttataaagcca
gacttcatttggaaggatcgctttcatggtgcttctctacattggtggattcttgttgag
gattctgagaatgatcatatctatcattcagagttcttcacattaacaaagcggatggca
gcaggagaatcacaaaagctttctttcactgttcctatttttgaaccacatccacctcag
tactacattcgtgctgtttctgattcttggttgtatgctgaagcttttcacaccatctct
ttccaaaatctagccttgccagacgcttatacatcccacactgaacttcttgatttaaag
cctcttcctgtgactgcacttggcaatagggcttacgaggacttgtataagttttcacac
ttcaatccaattcagacccagactttccatgtcctttatcacacagagaacaatgttctc
ttgggagctccaacaggaagtggtaaaactatatcagctgaacttgcaatgcttcatctt
ttcaataatcagccagatatgaaggttatctacatagcacctttgaaggccattgttcgg
gaaagaatgaatgattggagaaagcgtcttgtttctcagcttggaaaaaagatggttgaa
atgactggggattttactccggatttaatggcactgttatcagcagatatcataatttct
actcctgagaagtgggatggtattagtcgtaattggcatagtcgaagctatgtaatgaag
gttgggcttctgatattggatgagattcacttacttggggctgatcgtggacccattctt
gaggttattgtctccagaataagatatatatcatcccaaacagagcgtgccgtgcgattt
gtaggcctctcaacagcattagcaaatgcacgtgatttagctgattggttgggtgttgga
gacattggactattcaatttcaagcctagcgtgaggcctgtacctcttgaagttcacatc
cagggataccctgggaagttctactgcccaagaatgaatagtatgaataaacctgcatat
gctgcgatatgtacccattcacctacgaaaccagttcttatttttgtttcatctcgtcgc
caaacaaggcttactgcgctagacctcattcagtttgcagcttcagatgaacattctagg
cagttccttcatatgccagaagatgcattgcagatggtactttctcaggtcactgatcag
aacctatggcatactttacaatttggaattggattgcaccatgcaggattgaatgataaa
gatagatctcttgttgaggaactttttgcaaataacaagatccaggttctggtatgcacc
agcacattagcatggggtgttaatcttccagctcatctggttattatcaagggaactgaa
tattatgatgggaaggcaaaaagatacgtcgattttcccattacagatatcttgcaaatg
atgggacgtgctgggcgaccacagtatgaccaacatggaaaagcagcaattcttgtgcat
gaacccaaaaagagcttctacaagaagtttctttacgaaccgttcccagttgagagtagt
ctgagggagcacttgcacgatcacattaatgcagagattgtttcagggacaatttgccac
aaggaggatgccgtgcattatctcacgtggacttacttgtttcgccgattggttgttaat
ccagcctactatggattagaggatacagaaaccagaactttgaattcatacttgtcaagc
ttggtgcaaaacacttttgaggatctggaggatagtggatgcatcaagatagatgaagac
agtgttgagcccctaatgttgggctctatagcatctcagtattaccttagttacctgact
gtatcaatgtttggttcaaacataggcccggatacatcacttgaagttttcctgcttata
ctctctggtgcttctgagtacaatgaacttcctgtccggcataatgaggaaaactataat
gaagcattatcagagaaagttcgatatctggtggataagaatcgcctagacgatccacat
gttaaagcaaatattctatttcaggcacacttctcacagttagaattgccaatcagtgac
tatgttactgacttaaagtcagtgttggatcaaagcatacgtatcattcaagctatgata
gatatttgtgctaacagtggatggcttgcaagtgcattaacttgtatgcatcttttgcag
atggtcatgcagggtttatggtttgatcaggattcttctctatggatgttgccatgcatg
aatgctggtcttgcaagtactctttccaaagaaggtatttcaaatgtgcagcaactattg
gatcttcctgaggcaactttgcaggttctagttgaaaatttccctgcttcacggttatat
caggatctgcagcttttcccacgtgtgaaagtgagtttgaagcttaagagaagagactcg
gaggatgcaaagcatgtcatcctcaacattaaattggtgaaaacaaattctaaatacaca
acatcaagagcatttgctcctcgattcccaaagctaaaagaggaagcatggtggttggtt
cttgggaacgtatcgacatttgaactgtatgcactgaagagagtttccttctctggcagc
ttggtcactcacatggatttaccatcaacagctattaatctcccggtaagtatatgcttc
tcctttccttctcatacattttattgttggcttgctttattgatttaa
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integrated database retrieval system
