Telopea speciosissima (New South Wales waratah): 122670906
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Entry
122670906 CDS
T07910
Name
(RefSeq) coatomer subunit beta'-1 isoform X1
KO
K17302
coatomer subunit beta'
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122670906
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tss04147
]
122670906
Membrane trafficking [BR:
tss04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
122670906
Exosome [BR:
tss04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122670906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
NBCH_WD40
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_WDR75_2nd
WD40_RFWD3
Beta-prop_WDR35_TULP_N
TPR_2
Beta-prop_Nup120_160
TPR_1
WD40_like
WD_LRWD1
TPR_8
TPR_12
Clathrin
HEAT_GCN1
TPR_GEMI5
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
122670906
NCBI-ProteinID:
XP_043723865
LinkDB
All DBs
Position
8:complement(21151068..21187838)
Genome browser
AA seq
905 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGSVCIWNYQSQTMAKSFEVTELPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCLSVHPTLPYVLSSSDD
MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYMKGSRRVVIGYDEGSIMIKIG
REEPVASMDSSGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSTEGEYAVRESTSRIKIFSKTFQ
EKKTIRPTFSAERIFGGNLLAMCSNDFICFYDWGDCRLIRRIDVNVKNLYWADSGDLVAI
ASDTSFYVLKYNRDVVSSYLDSGRAVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDLERANEVLTSIPKEHYNSVARFLESRGMLEEALEVATDPNYRFDLAVQLGRLEVAKA
IAIEVQSESKWKQLGELAMSTGKLEMAEECLQHAMDLSGLLLLYSAFGDAEGISKLASLA
KEQGKNNVAFLCLFMLGKLEECLQLLVESNRIPEAALMARSYLPSKVAEIIAIWRNDLNK
VNQKAAESLADPEEYPNLFEDWQVALAIESKVAEKRGIYPPAEEYLSYAEKLNVNLLEAF
KSMQIDGEEEAPLENGDTDTGHEEMEENGEEVQEDAVEVDGDSTDGVVLVNGNEADEEWV
LAPHH
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagactcgaaataaagagaaaacttgcgcaaagatcagaaagagtaaaatca
gtggatctacatccaacagaaccatggattcttgcaagcctttattcgggaagtgtatgc
atctggaactaccagtcacagactatggcaaaatcttttgaggtcactgagttgccagtt
cgatcagccaaatttatagcacgcaagcaatgggttgttgccggagctgatgacatgttc
atacgtgtatacaattacaacacgatggacaaggtcaaagtgttcgaagcacacacagat
tacatcaggtgtctgtcagtccatccaacgcttccatatgtgttatcatcatctgatgac
atgcttataaagctctgggattgggagaagggttggatgtgcactcaaatttttgagggg
cattcccactatgtaatgcaagtgacattcaatccaaaagacaccaacacttttgctagt
gcctctctggatcggactataaagatttggaatcttggctcccctgacccaaattttacg
ttggatgcccatttgaaaggggtaaactgcgttgattacttcactggtggggacaagcca
tatctgatcactggttctgatgatcatactgctaaggtatgggactaccaaaccaaaagt
tgtgtccaaacgctagaaggtcacacacacaatgtttctgcagtttgtttccatcctgaa
cttccaataataattacaggctctgaggatgggactgttcgtatatggcattcaaccact
tataggcttgaaaacacattgaattatggccttgagagagtgtgggctattggatacatg
aaaggttcacgccgggttgtgattggatatgatgaaggaagcattatgataaaaattggc
cgagaagagccagttgctagtatggatagtagtggtaaaataatatgggctaagcataat
gaaatccagactgtgaacattaagagtgttggtgcagattttgaggtgacagatggagaa
cgattgcctttggctgtgaaggagttggggacctgtgatctttaccctcagagcttgaag
cacaacccaaacgggaggtttgttgttgtttgtggggatggcgagtacatcatttatact
gctcttgcttggagaaatagatcctttgggtcagccctcgaatttgtttggtcaacagaa
ggagaatatgctgttagagagagtacatcaaggattaagatattcagtaaaacattccag
gaaaagaagaccatacgtccaacattttctgctgagcgtatttttgggggaaatttatta
gcaatgtgctcgaatgactttatatgcttttacgattggggtgactgtaggttgattcgc
cgaattgatgttaatgtcaaaaatctatattgggctgatagtggagatctagtggcaatt
gccagtgatacatcattttacgtccttaagtacaatcgagatgtcgtgtcatcttatttg
gatagtggaagagcagtagatgagcagggtgttgaggatgcttttgagcttctccatgag
acaaatgagagagtcaggacaggattatgggttggggactgtttcatttacaacaactct
tcttggcgacttaactactgtgttggtggcgaggttacgaccatgtttcacttggatcgg
cccatgtacttgttgggatatcttgctagtcaaagccgagtgtatcttatagacaaagaa
ttcaatgttatgggatacaccttgcttcttagtttgattgagtacaagactcttgtgatg
cgtggagacttggagcgggcaaatgaggtcttaacctcaattccaaaggagcattataat
agtgtggctcgtttcttggaatctcgaggtatgctagaggaggcactagaagtagcaact
gatcctaattacagatttgatctggccgtccagcttgggagactagaagttgcaaaggca
atcgccatagaagtacagagtgaatcgaaatggaagcagttgggggaattagccatgtct
actggaaagttagaaatggcagaagaatgcttacagcatgcaatggacttgagtggattg
ttgcttctttactctgcttttggagatgctgaaggaatctcaaaacttgcatctcttgct
aaagagcaaggaaagaacaatgttgcatttctctgtctttttatgctcggaaaattggag
gagtgccttcaactattagttgagagcaaccgaattcctgaagctgctttgatggcccgt
tcctacctgccaagcaaggtcgcagagataatcgcaatttggagaaatgatctgaataag
gttaaccaaaaagctgcagagtctttggcagatcccgaagagtaccctaatctatttgag
gactggcaggtagctcttgccattgaatctaaggttgcagagaaaaggggcatttaccct
cctgcggaagaatacttgagctatgccgagaaattgaatgtgaaccttttggaagctttc
aaaagcatgcaaattgatggagaggaagaggccccattggaaaatggagatactgatact
ggtcatgaggagatggaagaaaatggagaagaggtccaagaagatgctgttgaggtggac
ggcgattctacagatggagttgtccttgttaatggaaacgaggctgacgaagagtgggtg
cttgcaccacatcactag
DBGET
integrated database retrieval system
