Telopea speciosissima (New South Wales waratah): 122670976
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Entry
122670976 CDS
T07910
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tss03041
]
122670976
Spliceosome [BR:
tss03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122670976
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RRM_occluded
DUF4523
DUF6229
Motif
Other DBs
NCBI-GeneID:
122670976
NCBI-ProteinID:
XP_043723972
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All DBs
Position
8:15821973..15849333
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AA seq
467 aa
AA seq
DB search
MSSSSGQPQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFV
EFADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEIVNNKSSGDVAGNVLLVTIEGV
EAGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFSDAETASAARNALDGRSIPRYL
LPEHVGSCHLRISFSAHTDLNIKFQSHRSRDYTNPYLPVNPSAIEGTMQSTLGPDGKKKE
PESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGMQALVQYPDVTTAAVAK
EALEGHSIYDGGYCKLHLSYSRHTDLNVKAHNDRSRDYTIPDTGLLPMQQAAAIPTATGG
WQSQAGPLYPGNEYAVGAQTSVPDGQVAPWDPNMQAGRQTFVSVPSTFPGQTYSPTGVTP
YAPAGSLLGSSPLPQPQASMRLSQYGAHPNARPSSAPLAGQPPYYGQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcttcggggcagcctcagttccggtatacgcagacgccgtcgaaggtgctg
cacttgcgtaaccttccatgggaatgcactgaagaagagctcgtcgaactctgcaagcct
tttggcaagatcgtcaataccaaatgcaacgttggtgccaatcggaaccaggcctttgtt
gaattcgcagatttgaatcaagcaatctcaatggtttcatattatgctagttcatctgaa
cctgctcaggttcgtggtaagactgtatatattcaatactcaaataggcaagaaattgtc
aataacaagagctctggagatgttgctgggaatgtgttgctggttacgattgagggcgta
gaagctggagatgtcagcatagatgttattcacttggtcttttccgcttttgggtttgtg
cacaaaattgcaacttttgaaaaggctgctggatttcaggcattaatccagtttagtgat
gccgagactgcatctgctgcacgtaatgcattggatggcagaagtattcccagatacttg
cttccagagcatgttggatcatgtcacttgcgtatctcattttctgctcatactgatttg
aatatcaagtttcaatctcatcgtagcagggactacacaaatccttatcttcctgtaaat
ccttctgccattgagggaaccatgcagtctacgttgggtccagatgggaagaaaaaagaa
cctgagagtaacgtgcttcttgcttcaatcgagaatatgcaatatgctgtcacagttgat
gttcttcacacggtattttcagcgtttggtactgtccagaaaatagcgatatttgagaag
aatggtggaatgcaagcgctagttcaataccctgacgtcacaactgctgctgttgctaaa
gaagctttggaaggacatagcatctatgatggtggctactgtaagcttcatctgtcatac
tctcgtcatactgatctcaatgtaaaggctcacaatgacagaagtagggattatacaatc
cctgatacaggattgctgccaatgcaacaagctgctgctatacctactgctacaggtggt
tggcaaagtcaggctggcccgttatatcctggtaatgaatatgctgtaggtgcacagact
tcagttccagatggacaagtagcaccgtgggatcctaacatgcaagcaggcagacaaact
tttgtatcggttccgagcacatttcctggtcaaacatactcacctactggtgttactcca
tatgctcctgcaggaagtcttctgggctcctctcctctcccgcagcctcaggcttctatg
agattgtctcaatatggtgctcatccaaatgctcgcccttctagtgcaccactcgcaggg
cagcctccatattatggccaataa
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