Telopea speciosissima (New South Wales waratah): 122671035
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Entry
122671035 CDS
T07910
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122671035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122671035
03036 Chromosome and associated proteins [BR:
tss03036
]
122671035
Transcription machinery [BR:
tss03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122671035
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122671035
PBAF complex
122671035
GBAF(ncBAF) complex
122671035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
TFIIA
fvmX2
Motif
Other DBs
NCBI-GeneID:
122671035
NCBI-ProteinID:
XP_043724057
LinkDB
All DBs
Position
8:complement(4489071..4491689)
Genome browser
AA seq
580 aa
AA seq
DB search
MSTNNNNPTKNVGGTLSPFGNAGMVSSPMQMNHPAQLHSQSQAQTHGGSHFQGQFQSPLQ
SQAQAQALAQAQVQAFVQVQSQAQAQAQAQAQAQAQAQAQAHAAQAQAAHAQFQAQLQAQ
AQAQAQSLTQPQTTGIGHMSASSPSLSTPSTANAKRVLQKPPARPPGTATTNTVSPFKTM
ELTPAARRKKRKLPEKQIPDRVAALLPESSLYTQLLEFEARVDAALTRKKIDIQESLKNP
PCIQKTLRIYVFNTYANQSRTIPEKQNSELPSWSLKIIGRILEDGVDPDPSGVIQKPSAS
YPKFSSFFKRITINLDPSLYPENPTIIWENARSPAPHEGFEVRRKGDKEFTVNIRLEMNY
VPEKFKLSPALMELLGIEVDTRPRIIGAIWHYVKARKLQNPNDPSFFACDPPLRKVFGEE
KMKFSMVSQKISHHLSSPQPIHLEHKIRLSGPSPAGNACFDVLVDVPFPLQKEMSAFLAN
IEKHKEVDACDEAICAAIKKIHEHRKRRAFFLGFSQSPVEFINALIASQSRDLKLVAGEA
SRNAEKERRSDFYNQPWVEDAVIRYLNRKPAAGSDAPGST
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgaacaataataacccaacgaagaatgttgggggtactctttccccttttggt
aatgcggggatggtctcgtcacccatgcagatgaatcacccagctcagcttcactctcag
tcacaagctcaaacacatggaggctcacacttccagggtcagttccagtctcctctccag
tcccaagcccaagcccaagccttggcgcaggctcaagtccaagcttttgtgcaggttcag
tcacaagctcaggcacaagctcaggcacaagcacaagcacaagcacaagcacaagcacaa
gctcatgcagctcaagctcaagcagctcatgcccaatttcaagcccagttacaagctcaa
gctcaagctcaagctcagtcccttacccaaccccaaaccactggaattgggcatatgagt
gcgtcatctccatccctttcaacacccagcacagcaaatgcgaagcgggtattgcagaaa
cctccagcgcgtccacctggtactgctactactaatactgtttccccattcaaaaccatg
gagctaacccctgctgctcgtagaaaaaagcgaaaacttcctgagaagcagatacctgat
cgagtggcggcccttctacctgagtcttctctatacacccagctacttgagtttgaggca
agggtggacgctgctctcacaagaaagaagattgatatccaggaatctcttaaaaatcct
ccgtgtattcagaagactcttcggatttatgttttcaacacatatgccaatcagagccgc
acaatccctgagaagcagaactctgagctgccttcttggtcgcttaagataattgggagg
atattggaagacggtgttgatccagacccttctggtgtgatccagaaaccaagcgcatcg
taccccaagttctcttcctttttcaagagaattaccatcaacttggacccaagcctatat
ccggagaacccaaccattatatgggagaatgctcgatctcctgcaccacatgaaggcttt
gaggtgagaaggaaaggggacaaggaatttactgtgaatatacggctagaaatgaattat
gttcctgagaaatttaagctttcacctgctttgatggaacttctgggcattgaggttgat
acacgcccgagaattataggcgcaatttggcattatgtgaaggctagaaagctgcagaac
ccaaatgacccttctttctttgcttgtgacccacctcttcgaaaagtttttggggaggag
aagatgaaattttccatggtttcacagaagatatctcatcatctttcctcccctcagcct
attcatctcgagcataagatcaggctatctggtcccagcccagctgggaatgcttgcttt
gatgtattggtcgatgttccctttccattacagaaagagatgtctgcattcttggccaac
atagagaagcacaaagaggttgatgcttgtgatgaagctatttgtgctgctattaagaag
atccatgagcatcgtaagaggcgagcattctttcttgggtttagtcaatctcctgtggag
ttcattaatgcgttaattgcctcacaaagcagagacttgaagcttgttgctggggaagct
agtcgtaatgctgaaaaggagcgtcggtctgacttctacaaccaaccatgggttgaagat
gctgttattcgttatctgaacagaaagccagctgccggaagtgatgctcctggaagcact
tga
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