Telopea speciosissima (New South Wales waratah): 122671040
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Entry
122671040 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase SIS3-like
KO
K16284
E3 ubiquitin-protein ligase SIS3 [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122671040
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122671040
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122671040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
122671040
NCBI-ProteinID:
XP_043724066
LinkDB
All DBs
Position
8:11441894..11456559
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AA seq
379 aa
AA seq
DB search
MAIRGVDFKWYDGFFLSMLATSVIIVSINWKRYHLCTYPLHIWTVVDYTTVFVFRLLMFL
DNGLAAGMGLDLGWQQRYARFCGRIVVLSVLSLLLYPFLWAWTVIGTLWFTSARSCLPEE
GQKWGFLIWLLFSYCGLICIACISTGKWLARRQAHLLRAQQGIPISEYGVLVDMIRVPDW
AFEAAGQEMRGMGQDTAAYHPGLYLTTTQREAVEALIQELPKFRLKTVPTDCSECPICLE
EFCVGNEVRGLPCAHNFHVECIDEWLRLNAKCPRCRCSVFPNLDLSALSNLRADSGRTSA
SVVTTTRYVRAQPVGQSNLLRLQGLLRPIRSENALPGNDVENALEGAENGATVARGPTST
TLAPVMECLVVDQSTQIQH
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggccatcagaggtgttgatttcaagtggtatgatggcttcttcttgtccatgctcgcg
actagtgtaatcattgtttccatcaattggaagcgttaccatctatgtacataccctttg
catatatggactgtggttgactatacaactgtctttgttttccgtctgttgatgtttctc
gataatggcctagctgcagggatgggcttggatcttgggtggcagcaaagatatgctcgc
ttctgtggaagaattgtcgttctttcagttctttcactgctactttatccattcctttgg
gcttggactgtaattgggaccctttggtttactagtgcaagaagctgtttgcctgaggaa
ggtcagaaatggggtttccttatttggttgcttttcagctattgtggtctcatttgcatt
gcctgcatctctacaggaaagtggttggcgagaaggcaagcacacctgctacgtgctcaa
caagggattccaatttcggaatatggtgttttagttgacatgattcgggtaccagattgg
gcttttgaagctgctggtcaggaaatgagagggatgggccaagatacagctgcataccat
ccaggactttacttgactacaacccagagagaagcagtggaggcacttattcaggaactt
cccaagtttaggctaaagactgttccaactgattgcagcgaatgtcctatttgccttgaa
gagttctgtgtaggtaatgaggttcgtgggctcccgtgtgctcacaatttccatgtggag
tgcattgatgagtggcttcggttgaatgccaagtgtccacgctgtcgatgctctgtcttc
cctaaccttgacctcagtgccctctccaatctccgtgctgattccgggaggacgtctgcc
agtgttgtgaccaccacacgctatgtgcgagctcagcctgttggccagagtaatctgttg
aggttgcagggtctgctccgaccaatccgatcagagaatgctctaccaggaaatgatgtg
gaaaatgccttggaaggtgctgagaatggggcgactgtagctcgaggtcccacaagcacg
actctcgcaccggtgatggaatgcttagttgttgatcaatcaacccagattcaacactaa
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