Telopea speciosissima (New South Wales waratah): 122671072
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Entry
122671072 CDS
T07910
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122671072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122671072
03036 Chromosome and associated proteins [BR:
tss03036
]
122671072
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122671072
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122671072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
122671072
NCBI-ProteinID:
XP_043724098
LinkDB
All DBs
Position
8:65179987..65211764
Genome browser
AA seq
1021 aa
AA seq
DB search
MFGSSNPFGQSSTSPFGSQSVFGQTNNASSNPFTPKPFGSTSPFGSQTGSSIFGGTSTGV
FGATQSSSPLTSVPTFGASSSPAFGSSMPAFGASSTPAFGSSSSSFGGSSVFGQKPAFGG
FGSTPQTSPFGSTFQQTQPAFGSNLFGSTPFGASSQSAFGGSSTPAFGATSTPAFGATSS
PAFGATSTPAFGSTTTPTFGSTGTAFGVSSSPAFGSGGAFGASSTPVFGASSTPAFGASS
TPTFGASNSSAFGASSAPSFSFGSSPAFGQSSSAFGSSPFGTTPSPFGAQSSPFGSQATT
PTFASSGFGQSNFGGQRGGSRVASYTPTPEVDGGGTQPAGKLESISAMPVYKDKSHEELR
WEDYQLGDKGGPNPAGQSAGGIGFAAPAAQSNPFAPSPAFGQSSTNPFSTPTSSNPFAPK
TPAFGSSGFGTSSTPAFGSSPFGSSSTSNPFGSTSSSTPSIFGASSAPVFGASSSPSLFG
GSTTSAFGSSSSIFGSASAPGMTSTFGSGLNFGNTQSTPLFQSTTPSLVQTGPTFGQTAS
AFGLNTASSIGQSSIFSKPSTGFGGNLFSATPSLLNSSNPVGYGQTTSMQPSQTSGAFSF
GNFGQTQPGASSGFGGVSSVFGQGTFGQSSATQGSMGMQPVPVSNPFGTLPAMPQMSIGR
TGSASSIQYGISSMPVMDMPAPARVSSLLTSRHLSQRRMRLPVRKYHPKNDGPKVPFFSD
DEEAPSTPKADALFIPRENPRALVIRPTEQWPSKASADKLSSLKDNSNHAQENGKISGNV
APPASNGAVTHDKDNGNGAGGPAEGGTDKERTPTKINLKENGVHDDNSTQKGDSYITLTG
HRAGEAAIVYEHGADIEALMPKLRHSDYYTEPRIQELAAKERAESGFCRRVKDFVVGRYG
YGSIKFIGETDVRRLDLESLVQFNHREVIVYMDESKKPPVGHGLNKPAEVTLLNIKCFDK
KTGQQYTEGPKVEKYKEMLKKKAQDQGAEFVSYDPIEGEWKFRVSHFSRYKLQDEDDCDS
D
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgttcggttcgagtaacccctttgggcaatcatcaactagcccatttgggtctcagtct
gtttttggtcagactaacaatgccagcagcaacccgttcacccccaaaccctttggtagt
actagcccatttggttcacagacggggagttccatatttggtggcacatcaactggcgtg
tttggagcaactcagtcttcttctcctctaacctctgtgccaacatttggtgcttcgtca
tcaccggcttttggaagttcaatgcctgcctttggcgcttcttcaacgcctgcttttggc
agctcttcgtcctcatttggtggatcttctgtctttgggcagaagcctgcttttggaggc
tttggatcgactcctcagacaagtccctttggaagcacatttcagcaaactcaaccagca
ttcggtagcaatctgtttggttcaacgccctttggtgcgtcaagtcagtctgcatttggt
gggtctagcacaccagctttcggtgcaacaagtacacctgcttttggtgctacaagcagc
ccagcatttggtgccacaagtacccctgcttttggatctacgacaactccaacatttggt
agcacgggtacagcctttggtgtgtccagttcaccagcatttggatctgggggagcattt
ggggcttcaagcacccctgtttttggtgcttctagtactcctgcatttggtgcttctagt
actcctacttttggtgcttcaaattcttctgcttttggcgcttcaagtgctccatccttc
agttttggttcatctccagcgtttggtcaatcaagttctgcattcggcagcagcccattt
ggaactacaccatctccttttggagcacagagttctccttttggatcccaggctacaaca
ccaacgtttgcaagctcgggctttggccagtcaaattttggtggccaacgtgggggtagt
agagtggcatcttacacacctacacctgaggtggatggcggtggcacacagcctgctgga
aagctggagtcaatatcagcaatgcctgtttacaaagataaaagccatgaagaattgagg
tgggaggactaccagttgggcgataaaggtggtcccaatcctgctggtcaatctgctgga
gggattggttttgctgcgcctgctgcacagtcaaacccgtttgctccttcacctgcattt
ggtcagtcatccaccaatcctttttccacaccaacttcttccaacccgttcgctccaaaa
acacctgcatttggctcgtcgggttttggaacttcatctactccagcatttggttcatct
ccctttggctcgtcatctacatctaacccatttggttcaacttcatcttccacaccatct
atatttggagcatcatcggcccctgtatttggagctagttcatctccatctctttttggt
ggatcaacgacatctgcatttggatcttcttcctcaatctttggatctgcttctgctcct
ggaatgacatcaacatttggttctggtttgaattttggtaacacccagtcgaccccatta
ttccagtctactacaccttcgcttgtgcaaacgggtcctacttttggacagactgcttca
gcctttgggctgaatactgcctcctccattggtcagtcgagcatattcagcaaaccatca
actggatttggaggaaacttgttctcagccactccatcactgctgaattcgagcaatcca
gtaggttatggccaaacaacttcaatgcaaccttctcagacatctggggccttttctttt
ggaaattttggacagacacaaccaggagcttcaagtgggtttggtggtgtttcgagtgtc
tttggccagggaacttttggacaatcttctgccactcagggctctatgggcatgcaacca
gtgcctgtgtcaaatccttttggaactcttcctgcaatgcctcagatgtcaattggtcgc
actggatctgcatcctcaattcagtatggaatttctagtatgccggtcatggacatgcct
gctccagcaagagtttcctccttgttaacttctcggcacttatctcaaagaaggatgagg
ttgccagtaaggaaatatcatcctaaaaatgatggtccaaaggtccccttttttagtgat
gatgaagaagcacctagcacaccaaaggcagatgctctttttatcccaagggagaatccg
agagcgctggttattcgtcccacagaacaatggccctcaaaagctagtgcagacaaatta
tcttcgctgaaggataattctaatcatgctcaggaaaatggaaaaatatctgggaatgtt
gcacctcctgcttcaaatggtgctgttactcatgataaagacaatggaaatggtgcaggt
ggtcctgctgaaggtggtactgacaaggaaaggactcctaccaaaatcaatctgaaggaa
aatggggtacatgatgataattccacacaaaagggagactcatacattactctcactggg
cacagggctggcgaagctgcaattgtgtatgagcatggggctgacattgaggcactaatg
ccaaagcttcggcattctgactactacacagagcctcgaatccaagagctggcggccaag
gaaagggctgagtcagggttctgccgccgagtgaaggattttgtggttggacggtatggt
tatggtagtatcaagttcataggggagactgatgtgcggcggctagatcttgagtctctg
gttcaatttaaccaccgggaggtgatcgtatacatggatgaaagtaagaagccccctgtt
gggcacgggctcaacaaacccgctgaggtaactcttctcaacatcaaatgctttgacaag
aagacagggcagcagtatacagaagggccaaaagttgagaaatacaaagagatgctaaag
aagaaggcacaagaccaaggtgctgagtttgtatcctatgacccaattgaaggggaatgg
aaatttagggtcagccatttcagtcgatacaagctccaagatgaagatgattgtgattct
gactga
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