Telopea speciosissima (New South Wales waratah): 122671181
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Entry
122671181 CDS
T07910
Name
(RefSeq) tRNA pseudouridine synthase A 1 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tss03016
]
122671181
Enzymes [BR:
tss01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
122671181
Transfer RNA biogenesis [BR:
tss03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122671181
Prokaryotic type
122671181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
122671181
NCBI-ProteinID:
XP_043724219
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All DBs
Position
8:64291989..64305752
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AA seq
324 aa
AA seq
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MGFAVVALRPPLNAFLCSSNDNSNRDGGTEHQSQEVRFALPGYKWRMIIAYDGTKFSGWQ
YQQSSPTVQCLVERALTQITMLERKELGLVGASRTDTGVHAWGQVAHFVTPFNYNSLESI
HAALNGLLPFDIRVREISPALPDFHARFSAKSKVYHYKIYNDTIMDPLQRFYAYHSTYRL
NTIVMREAARHFIGKHDFSAFSNASHNDRLPDPVKCIFRFDVVEKGALLQLEVEGSGFLY
RQVRNMVALLLQIGKEAVPPDIVQKILLTRDRKELAKYALSAPPQGLCLISVKYNEEVLQ
PPLGCPSTSFGQNQCVSKCKLPFY
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgctgtcgtcgctcttcgtccacctctgaatgcatttctctgctcaagtaac
gataactcgaatcgggacggcggtacagagcaccaaagccaggaagtacgcttcgctctt
cccggctataagtggcgtatgatcatagcatacgatggcaccaaattttctggctggcaa
tatcagcagtcatcaccaactgtacagtgccttgtggaaagagctttaactcagataaca
atgctagaaagaaaggagcttggattggttggtgcaagtaggacagacactggagttcat
gcctggggtcaggtggcacactttgttactcctttcaactataacagtttggagagcatt
catgcagcgcttaatggtcttcttccttttgatatccgagttagagagattagtccagca
ctacctgatttccatgctcgattttcagcgaagagcaaggtttatcactataagatatat
aatgacaccattatggacccattacagcggttctacgcatatcatagcacttatagactg
aacacgattgtcatgagggaggctgcaaggcatttcattggaaagcatgacttctctgct
ttctctaatgcatcccacaatgatcgattgccagatcctgtgaagtgtattttccgtttt
gatgttgtcgaaaagggagctcttctacaacttgaggttgaaggctctggtttcttgtat
agacaagtgcggaacatggtcgctttgctgcttcaaattggaaaggaggcagttcctcct
gatattgtccaaaaaattttgttaactagagatcggaaagaacttgcaaagtatgcctta
tctgcccctccacaaggactctgccttatatcagtcaagtacaatgaagaggtcctacag
cctccccttggttgcccttcgaccagctttggccagaatcaatgtgtaagtaaatgcaag
cttccattctattga
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