Telopea speciosissima (New South Wales waratah): 122671248
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Entry
122671248 CDS
T07910
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00040
Pentose and glucuronate interconversions
tss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122671248
Enzymes [BR:
tss01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122671248
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122671248
NCBI-ProteinID:
XP_043724309
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Position
8:complement(7717068..7718469)
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AA seq
439 aa
AA seq
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MESVKAIILFAFFFFTYVVKAHIAEMDAVWQHRAKVAEMRTIANYEPHPETVTKNFMAKV
DKVLKADDQVHLNTTRRSLRKYVGPCLATNPIDRCWRCKPDWHKKRKSYAKCVLGFGRKT
RGGKKGKYYVVTDASDNDMVNPKPGTLRYGVIQKEPLWIYFAKDMIIRLNQELMVSCNKT
IDGRGANVHIAYGAGITIQYVDNVIITNLHVHDIVSGNGGMIRDSVDHYGLRTASDGDGV
SIFGSTNIWVDHMSMSRCKDGLIDAIMGSTAITLSNNHFTHHNEVMLFGASDGYSADEKM
QITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSMHPTIVSQGNRFVAPPT
LAAKEVTKRDYSPEEVWKEWVWRSEGDLLENGAFFRQSGSPFKNRPFSKKDMISYKPGTF
VSRLTRFAGALNCEIGKPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagtgaaggccatcatcttatttgccttctttttcttcacatatgttgtgaaa
gcccacattgctgaaatggatgccgtgtggcaacatcgtgccaaagtagccgagatgcgc
accattgccaactatgaacctcatcccgagacagtcaccaaaaatttcatggccaaagta
gacaaggtattaaaggcggacgatcaagtccatctcaacaccactagaaggtcactgcgg
aaatacgtaggaccatgcttggcaaccaacccaatcgataggtgttggaggtgcaaacct
gactggcacaagaagcgtaagagctatgccaagtgtgtgttagggttcggcaggaagacc
agaggtggaaagaaaggtaaatactacgttgtcaccgatgcatccgacaacgatatggtg
aatcccaaacctggaacccttcgttacggtgtcatccaaaaagaacccctttggatctac
ttcgctaaggacatgatcatccgtctcaaccaagaactcatggtttcttgcaacaaaacc
atcgatggtcgtggtgctaatgtccatatcgcttatggtgccggcattacaatccagtat
gtcgataatgtcatcattacaaatctccatgtccacgatattgtttccggcaatggtggt
atgattcgtgattccgtcgaccattacgggcttcgcaccgccagtgatggcgatggtgtt
tcaattttcggttctaccaatatctgggtagatcacatgtcgatgtctcgttgcaaagat
ggattaattgatgcaattatgggttctactgcaattaccctttctaacaatcacttcact
catcacaacgaggttatgcttttcggagcaagcgatggttactctgctgatgagaagatg
caaattactgtagcattcaaccattttggaagaggattggtacagaggatgccaagatgc
agatggggattctttcatgttgtgaacaatgattatacacattggttaatgtatgctatt
ggtggtagtatgcacccaacaattgttagtcaaggtaaccgtttcgttgcaccaccaaca
ttggcggcgaaagaagttacaaagagggattactcacctgaggaagtatggaaggaatgg
gtatggagatctgaaggagatttgttggagaacggtgcttttttcaggcaatcaggtagt
ccatttaagaataggccattctcaaagaaggatatgatctcatataagcctggtaccttt
gttagtagacttactcgtttcgctggtgcactcaactgcgagatcggcaagccttgctaa
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