Telopea speciosissima (New South Wales waratah): 122671259
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Entry
122671259 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase RHF1A-like
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122671259
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122671259
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122671259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-RING_Vps41
zf-C3HC4_4
zf_RING_Vps8
zf-Nse
zf-C3HC4_3
RING_XB3-XBAT31
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
122671259
NCBI-ProteinID:
XP_043724324
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Position
8:60274714..60277557
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AA seq
382 aa
AA seq
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MEGFTSSVENPIVLTPMPPVADPDACEDVCSICLEPFSSDDPATITNCRHEYHLQCILEW
SQRSKECPICWQSLVLKDPASQELLAAVEIERNSRSWHRLSNTHLPPEDYQFSHDAPYTD
DSDFHERIMQHLAADALGRRHFSRRGRRRTSGMDPSQIFVFASPENESDVQDTYITASTE
PQNMLSPHASPESIQPSAINARAPSSPVSSYVHMSSDTSDHSVLSRETPPSSPQSSRSSE
LLSFSESLKSRFTAASAKYKESISRSTRGFREKLLARNNSVKELSREVQREVSASIAGVA
RIMERLDPISKRAGGSAPPSRSSEGTSSFSYEGKGVQENPIVQSQNKNDVEIVDGTDSNA
PFHVMGSLSSVPGRLKFPQAQV
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggagggtttcacttcatcagtcgagaatccgattgtgttgacgccaatgcctccagtc
gccgatccagatgcatgtgaagacgtctgtagcatttgcttggagcctttctcttctgat
gatcctgccactattaccaattgcagacacgagtatcatcttcagtgtatccttgaatgg
tctcaaagaagcaaagagtgcccaatatgctggcaatcgcttgtcttgaaggaccctgcc
agtcaggagcttcttgcagcagtggaaattgaaaggaattcaagatcatggcatagattg
tccaatactcaccttccccctgaagactatcaattcagccatgatgctccctacacagat
gattcagattttcatgagcgaattatgcagcatctagctgctgatgcccttggcaggcga
cattttagtaggagggggaggcgcagaacctctggcatggatccatcccaaatctttgtt
tttgcctctcctgaaaatgaatctgatgttcaggatacatacataactgcatcaacagaa
cctcaaaatatgttatctcctcatgcttctccagaaagtatccaaccttctgccatcaat
gctcgggcaccatcctctccagtttcttcttatgtacatatgagctctgacacttcagac
catagtgttctttctagagagacaccacccagcagtccccaaagctctcgctcatctgag
ttgctctccttctcagaatcacttaaatctagatttactgctgcgtctgccaaatataaa
gaatcaatctcgagaagtaccagaggtttccgggagaagctattggcacggaacaattca
gttaaggagctgagcagggaagttcagcgtgaggtgagtgctagtattgctggtgttgct
cgcattatggagcgtctcgatcctatatcaaagcgtgcaggaggttcagcacctccttcc
agatctagtgaagggacctcaagtttttcttacgaagggaagggtgtgcaagaaaaccca
attgttcagtcccaaaataaaaatgatgtggaaattgttgatggcacagattccaatgca
cctttccatgtcatgggaagcctttcttctgttccaggtcgtttgaaatttcctcaagca
caggtctaa
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