Telopea speciosissima (New South Wales waratah): 122671357
Help
Entry
122671357 CDS
T07910
Name
(RefSeq) nuclear pore complex protein NUP93A-like isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122671357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122671357
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122671357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
122671357
NCBI-ProteinID:
XP_043724452
LinkDB
All DBs
Position
8:59498873..59530113
Genome browser
AA seq
863 aa
AA seq
DB search
MATEPDMSSWTDLLHSSTKLLEQAATSAQFPPLQRNLDQLEVLSKKLKAKTLRTEAPTQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEA
QKDNLRSFNDYMLQVLEDDWQKEKRDFLQSLSRLSTLPRTSSSALSTVVTRPGQMMSIGS
SPQVSTGPSSMEILPLAKKPVLEKKASVYAEVVRNLNNARERGLPFKPATAFRGAYESLG
LDASGGKSVSMQKIWHLIQSLMGEDSAIQQKVSRKMSLVIGARRHLEWGHEKYIMDTIQS
HPAQAALGGGVGNLQRIRAFLRVRLRDYGVLDFDSSEARRQPPVDTTWQQIYFCLRTGYY
DEARNIALTSRASHQFAPQLAEWITTGGMVSAETAAAASEECDRMLRMGDRAGRAGYDKK
KLLLYAIVSGCRRHIDRLLRDMPMLFHTIEDFLWFKLSAVRDCPSVASSVVLNEGFVPYT
LEDLQLYLNKFEPSHYTKNGKDPLVYPYVLLLSIQLLPAILYLSKETGDEGFNIDAVHIS
IVLADHGVLSESVGPGQKLGVMDAFAEAASIIRQYGSAYLRLGNLSVTLEYYAQAAAAVG
GGQLSWIGRGNIDQQRQRCLMLKQLLTELLLRDGGIYLLLGSRGFGEEGELRRFLTDRKA
QQQFLLEVARQCQEAGLYDKSIEIQKRVGAFSMALETINRCLSEAIYALSRGRLDGHSRT
AGLIHSGNEILEMYKYSSEISLQDREHVSEQQMVLRQLEAILFIHKLAREGNHLDALREV
TKLSFLPLDPRAPDVTADVFQNLSPHIQTCVPDLLKVALSCLDNVTDTDGSLHALRTKIA
NFVANNLTRNWPRDLYEKVARIV
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaaccggacatgagtagctggaccgatctcctccactcatccaccaagctt
ctcgaacaagctgctacatctgctcagttccctcctttgcagagaaacttggaccaattg
gaagtgttgtcgaagaagctcaaggcgaaaaccctaaggactgaagctcctacccaatcc
attgccgccaccaggttgctggcacgcgaaggaatcaatgctgagcagcttgcacgggat
ctcaagtcttttgagttaaagacaacatttgaagatgtgtttcctgctgaggcaacaagt
gtcgaagaatatctgcagcaggttcatgagatggctatggtttcagctatccaagaagca
cagaaggataaccttaggagtttcaatgattacatgttgcaagttttggaggatgattgg
caaaaggaaaagcgggatttcctgcaaagcttgagccggctctcaacattaccgaggacc
agcagtagtgcattaagtactgtggtcacccgtcctggccagatgatgtccattggttct
agtcctcaggtttccactggtccatcaagtatggagattttgcctctagctaagaagcct
gtccttgagaaaaaggcttcagtctatgccgaggttgtgaggaatctcaataatgccaga
gagcgtggcttgccatttaaacctgctacagctttcaggggtgcttatgaaagtctcggg
ctagatgcttctggtgggaaatcagttagcatgcagaagatatggcacctgattcagtcc
ttgatgggtgaggattcagctattcagcaaaaggtttcaagaaaaatgtcattagtaatt
ggtgcaagacgacacttggaatgggggcatgagaagtatatcatggacacgatccaaagt
caccctgcacaggctgctcttggtggtggtgttggaaacttgcaacgaattcgtgctttt
ctcagggtacgtttgagggattatggagttctagattttgattccagtgaagctcgtagg
cagcctccagttgatacaacttggcagcagatctatttttgcttgcgaactggctattat
gatgaagcaagaaatattgctctaacttctcgtgcttctcaccagtttgctcctcagctt
gcagaatggattacaactggaggtatggtgtcagctgagaccgcagctgctgcttcagaa
gaatgtgatagaatgttgagaatgggagatcgggcaggtcgagctgggtatgataagaag
aagttgctactttatgctattgtttctggttgtcgcagacatattgacaggttgcttaga
gacatgccgatgcttttccatacaatagaagattttttgtggttcaaattgtcagctgta
cgagattgtcctagtgtggcttcttctgttgtcctgaatgaaggctttgtaccctatact
ttagaagatctgcagttatacctaaataaatttgagccctcacattacacaaagaatgga
aaggatcctttagtctatccgtatgtgttacttttgagcatccagttgctaccagcaatc
ctatacttatccaaggaaacaggagatgaaggattcaacattgatgctgtccacatttct
attgtgctagcagaccatggggtcctttctgaaagtgttgggcctggccagaagctgggg
gtaatggatgcttttgcagaagcagctagcattattaggcagtatggatctgcgtacttg
cgtctgggaaatctttcagtaacattggaatattatgcacaagcggctgcagcagtgggt
ggtggacagttatcatggattggtcgaggcaacattgatcaacaaaggcaaagatgttta
atgctaaaacaactccttactgaactattgttacgggatggtgggatttaccttctactc
ggttcaagaggttttggggaagaaggtgagctgagaagattcttgactgataggaaagca
caacaacaatttctgcttgaagttgctcgccagtgtcaggaagctgggctttatgacaaa
tcaatagaaattcaaaagagagttggggcattttcaatggcgttggagacaataaataga
tgcctctcagaagcaatctatgctctatcacgtggtagattggatggtcacagccggact
gctggtcttattcactctggcaatgagatacttgagatgtacaaatattcttcagagatc
agtcttcaagatagggagcatgtttcggagcaacaaatggtgttaagacaacttgaggca
atcttgttcatccacaagctggctagggaaggcaatcatttagatgctcttagggaggtt
accaagctctccttcctacccttagatccacgggcaccagatgtcacagctgatgtgttc
cagaatttatctcctcatatccaaacttgtgtgccagatctcttaaaggttgctcttagt
tgtttggacaatgtgacagatactgatggatcacttcatgccttgaggactaagatagca
aattttgtggcgaacaatttgacgaggaattggcctcgtgatttgtatgaaaaggttgcc
cggatcgtctga
DBGET
integrated database retrieval system
