Telopea speciosissima (New South Wales waratah): 122671450
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Entry
122671450 CDS
T07910
Name
(RefSeq) E3 ubiquitin-protein ligase ZNF598
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tss04121
]
122671450
Enzymes [BR:
tss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122671450
Ubiquitin system [BR:
tss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122671450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
122671450
NCBI-ProteinID:
XP_043724595
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Position
8:complement(63890875..63897869)
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AA seq
866 aa
AA seq
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MDDSCAVCAEPLEWVAYGPCGHREVCSTCVARLRFICDDRRCCICKTECKIVFVTKALGD
YTRMITDFSVFPSDSSEGQVGAYYYHEDTQAFFDDSDHYKMIRAMCRLSCSVCDRMGDEG
NDSSTRKGKFRNIEQLKSHLYHRHRLFMCSLCLEGRKIFICEQKLYTRSQLNQHINTGNS
EVDGSESERGGFMGHPMCEFCKRPFYGDNELYSHMSTEHFTCHICQRQHPGQFEYYKDYD
DLEIHFRREHFLCEDEACLVKKFIVFPTESELKRHNAIEHGGQMSRSKRNAALQIPTSFR
YRRSNEQDHRRGRGRGFRSESSDGQLSLAIQASLETANMENTTHDPSSSYTQVSDRAKST
ELETSPDPFESSFPPETMTPSETSSRYRQALGHNSINAPLQESFFPPLPLAQVSSQQKPK
HAPEGTAKNTMAARLRHRNSGTVNVLNSAQAWPAARSATSTSTQFRPPTSYGLVSPSPTI
SSQSKLVTTNGPAPSSYASFGQGRPATVHGLASASSASSSWNSGGGAGGRVSLSASAPNP
VVAGSLDSSMSNFPPVSATQKHNLQKDSLPLPDVKDVHTANKSLVERMREALELDESKFT
AFKDLSAEYRQGVIDAVEYLAYAQQFGLSHLVPELARLCPDAQKQKVLLETYNANLWNST
QQNGWDCSSDHSKDIKSGNKGKGKCLGTANSNSMGNLVRNKGKGKCSEGANTEETLADRI
MNTVKKLQLDHKPPEGDVEVLSKDGYRASRGKSKAFVDDRVRLTAAGSDVAELTNQNDSH
SPGGGGLNQSLATGGGSKQRKKTSKFLRVRLGDGSAAGVLELMDSGPNSEQVEETGNGKS
SSGENLPVRGVWRNGGGQRLMRQGGK
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagttgtgcagtctgcgccgaacctcttgaatgggtcgcttacggaccatgt
ggtcatcgcgaggtctgctcgacctgcgtcgctcgtcttcgattcatctgcgacgatcgg
cgttgttgcatctgcaagaccgaatgcaaaattgttttcgtcacgaaggctttaggagat
tatacgaggatgataactgacttctcggtctttccatctgattcgtccgagggtcaagtt
ggggcatactattaccatgaggacacacaggctttttttgatgattcagatcattacaaa
atgatcagagcaatgtgtaggctctcttgcagtgtgtgtgacaggatgggggatgaaggg
aatgacagctccacgagaaagggaaaatttagaaacattgagcagttgaagagccattta
tatcaccggcacagattatttatgtgtagtctatgtttggaaggaaggaagatatttatt
tgtgaacaaaagctctatactagatcacagttgaatcaacatataaacacaggaaattct
gaagtggatggaagtgaaagtgaaagaggtggctttatgggtcatcccatgtgtgagttc
tgcaaacgtccattctatggggataatgagctgtattcacatatgtctactgaacatttt
acctgccacatatgccaaagacaacacccaggacagtttgaatactataaagactatgat
gacttggagattcatttccgtcgtgagcatttcctatgcgaggatgaggcctgccttgtc
aaaaaattcattgttttcccaacagaatcggaattgaagaggcataatgctatagagcac
ggcgggcaaatgtctcgttccaagcggaatgctgcccttcagattccaactagctttcga
tatcgaaggagtaatgaacaagatcatcgacgtggaaggggtcgtgggttccgttcagag
tcctctgatggtcaactttcattagctattcaagcgagtcttgagacggccaatatggag
aacacgacccatgacccttcttcctcctacacacaagtttctgatcgtgcaaagagtact
gaacttgaaacatccccagacccctttgaatcctcttttcctcctgaaactatgacacct
tctgagacttcttcaagataccgtcaggcactgggacataattctataaatgcaccttta
caagaatccttttttcctccccttcctctggcacaagttagcagtcaacagaagcctaag
catgcacctgaaggaacggctaagaacacgatggctgctcggcttcgtcaccgcaacagt
ggcactgtaaatgttctcaattcagctcaggcttggccggcagcaagatcagcaactagt
acttctactcagtttaggcctccaactagttatggacttgtatcacctagtcccaccatc
tcttcacagagtaagttagtcacaacaaatggtcctgcaccatctagttatgcaagtttt
ggtcagggtaggccagcaacagttcacggacttgcatcagctagctctgcaagttcatca
tggaattcaggtggtggtgctggtggtagggtcagcctttctgcatcggctcctaatcca
gtagtggcgggatccttggactcttccatgtctaattttcctcctgtttctgcaacacaa
aagcataacttacaaaaagatagcctgcctttgcctgatgttaaagatgttcatactgca
aacaaatctttggtggaaaggatgcgtgaagcccttgaattggatgagagcaaattcact
gctttcaaagatttatcagcagagtatcgtcaaggtgtgattgatgcggttgagtatcta
gcctatgctcagcagtttgggttgtcacatcttgttcctgagctagctagactctgtcct
gatgctcagaagcagaaagtgttgcttgaaacctacaatgccaatctgtggaattctacc
caacaaaatggatgggactgcagttctgatcactcgaaagacattaaaagtgggaacaaa
ggtaaaggcaagtgcttaggtactgcaaacagtaattcaatgggaaatttggtcaggaac
aagggtaaagggaagtgttcagaaggtgcaaatactgaggaaacattagcggacaggatc
atgaacactgtaaagaaactgcaattagatcataagcctcctgaaggagatgttgaggta
ctatcaaaagatggatatcgtgcttccagaggaaaatcaaaggcatttgttgatgatcgg
gtacggttgactgccgcaggttcagatgttgcagaattgacgaatcaaaatgattcacat
tctcctggtggtggtggtttgaaccaaagcttggcaactgggggaggaagtaaacaacgg
aagaagacatcaaagttcctaagagttcgtcttggtgatggctccgcggcaggtgtgtta
gagcttatggattccgggcccaattcagaacaagttgaagagacaggtaatgggaagagt
tcctctggtgaaaatttgccagttcgtggagtttggcgaaatggtggagggcagagactt
atgcggcagggaggcaagtga
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