Telopea speciosissima (New South Wales waratah): 122671479
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Entry
122671479 CDS
T07910
Name
(RefSeq) probable alpha-mannosidase At5g13980 isoform X1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
122671479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tss04131
]
122671479
Enzymes [BR:
tss01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
122671479
Membrane trafficking [BR:
tss04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
122671479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
122671479
NCBI-ProteinID:
XP_043724652
LinkDB
All DBs
Position
8:2120044..2185810
Genome browser
AA seq
1016 aa
AA seq
DB search
MAIGVLLLAFFVSFLCSESRYIAYNTSQGIVPGKINVHLVPHTHDDVGWLKTIDQYYVGS
NNSIQVACVQNVLDSVVPALLADKNRKFIYVEIAFFQRWWRDQSEAVKSTVKQLVSSAQL
EFINGGMCMHDEAAPHYIDMIDQTTMGHRFIKQEFGVTPRIGWQIDPFGHSAVQAYLLGA
EVGFDSLFFARIDYQDRDKRKNEKSLEFIWRGSKTLGSSAQIFAGAFHRGNYEPPSGFYF
EVNDDSPIVQDDISLFDYNVEERVNDFVAAALSQANVTRTNHIMWTMGTDFKYQYAHTWF
RNMDKLIHYVNEDGRVNALYSTPSIYTDAKHATSESWPVKTDDFFPYADRANAYWTGYFT
SRPALKRYVRLLSGYYLAARQLEFFKGRNNLRPNTDTLADALAVAQHHDAVSGTEKQHVA
NDYAKRLSIGYVEAEEIVGSSLAYLVESSNTARRKPMTKFEQCSLLNISYCPPSEMDFSR
GKSLVVVVYNSLGWKREDVVRIPVISESVTVQDSSGKVIESQLLPLANVSVGIRNYHVKA
YLGKSPGITPKYWLTFLASVPPLGFSTFIVSEAKQAGSSAIASTLHTSAGSENGTIEVGQ
GNLKLIYSIDEGKLTQYINSRSSVKASLHQSYSFYTGSNGTDKDPQASGAYIFRPNVTFP
ISSKGKDTLTVLRGPILDEVHQRINPWIYQVTRVYKAKEHAEVEFSVGPIPVDDGIGKEI
ITQITTTMDSNKTFYTDSNGRDFIKRIRDSRTDWDLQVNQPIAGNYYPINLGIYMVDNRT
EFSVLVDRSVGGSSVVDGQVELMLHRRLLHDDSRGVAESLNEQVCILDECTGLIIQGNFY
LRIDPLGEGAKWRRSAGQEIYSPFLLAFTEQVEGNWTSSHVSTFSGVDPSYNLPDNVALL
TLQELEDGNVLLRLAHLYEMGEDKDLAVMASVDLKKLFPEKKISKLVERNLSASQERAEM
EKKRLVWNVEGTSADEPKATRGESVDPAKLVVELSPMEIRTFIITFDYIFLPMVDF
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcggagtgcttttgctggctttctttgtgtcctttctctgctcggaatcaaga
tatatcgcttacaacacttcgcaggggattgttcccggaaaaattaatgttcatttggtt
cctcacacacacgatgacgttgggtggttgaagacaatcgaccaatactatgtcggctct
aacaattccattcaggtggcttgtgttcagaacgtattggattctgtagttccggcattg
ctggctgataagaaccgaaaattcatttacgttgaaattgcatttttccagcgttggtgg
agagatcagagcgaggcagtcaagagtacagtcaagcagctagtgagctcggctcaattg
gagtttataaatggaggcatgtgcatgcatgacgaggcagcaccgcattacattgacatg
attgatcagacaactatggggcatcgttttatcaagcaagagtttggtgtgacccccaga
attggctggcagattgatccctttggacattctgctgtgcaagcttacttgttgggggca
gaggttggatttgactcccttttctttgctcggattgattaccaagatagagataaaagg
aaaaatgagaaaagtcttgagttcatctggcggggttcgaagacactagggtcatctgca
cagatttttgctggtgcattccatcgggggaattatgaacctccatctggtttctacttt
gaagttaatgatgattctcctattgttcaggatgacataagtttgttcgattacaacgtt
gaagagcgtgttaatgactttgtagctgctgcactctcacaggctaatgtaactcgcaca
aatcatataatgtggaccatggggacagatttcaagtatcaatatgcgcacacatggttc
agaaatatggacaagcttattcattatgtcaatgaggatgggcgtgttaatgcgctctat
tctaccccatcaatttacactgatgcaaaacatgctacaagtgaatcctggccagtcaag
actgatgacttcttcccatatgcagatcgtgcaaatgcttactggactgggtactttaca
agtaggccagctttgaaacgatatgtcagactgctgagtggttattatttggctgcaagg
caattggaattttttaaggggaggaataatttgaggcccaacacagatactttggctgat
gctttggctgttgctcaacaccatgatgcagttagtggaacagagaagcagcatgttgct
aatgattatgcaaaacggctttcaataggctatgtagaggcggaggagattgtggggtct
tcacttgcatacttggtagagtcatcaaatactgcacgcaggaagccaatgaccaagttt
gaacagtgttctcttttgaatataagctactgccccccatcagaaatggatttctctcgt
gggaaaagcttggttgttgttgtctacaattctcttggttggaagagggaagatgtggtt
cgaattcctgttatcagtgaatcagttactgttcaggattcaagcggaaaagtaattgaa
tcacagctgttacctcttgctaatgtttctgtgggcataagaaattaccatgttaaggca
tacttgggtaaatcccccggcattacacccaagtattggctcacattcttggcatctgtt
ccacctcttggtttcagtaccttcattgtctcagaagcaaaacaggcaggttctagtgca
attgcatcaacgttacacacatcagcaggtagtgaaaatggtacaatagaagtcggacaa
ggaaatttaaagcttatttattctattgacgaaggcaaacttactcagtatattaatagc
agaagctcggtcaaagcatctttgcatcagtcgtacagtttttacactggaagcaatgga
actgataaagatcctcaggcctctggagcatatatcttccgtccaaatgttacatttccc
ataagttccaaaggaaaggatactttaactgttctccggggaccaatattggatgaagta
catcaacgcatcaatccatggatatatcaggtcaccagggtgtacaaggcaaaggaacat
gctgaagtcgaattcagtgttggccctattcctgttgatgatggaatagggaaagaaatt
ataacccaaatcactactaccatggattccaacaagacattctatacagattctaatggg
cgcgatttcattaaaaggattcgtgattctagaacagattgggacctacaagtgaaccaa
cccattgctggaaattattacccaattaatcttggaatttacatggtagataataggact
gagttctcagtattggttgatcgatcagtgggtggatccagtgtggtggatggacaagta
gaactgatgcttcataggaggttgcttcatgatgattctagaggtgttgcagagtctttg
aatgaacaggtctgcatcctggatgaatgcacaggactaattatccaagggaatttttat
ctaagaattgaccctttgggtgagggtgctaagtggcgtcgttcagctggccaagaaata
tattctccatttctcttagccttcacagagcaggttgaaggtaactggacaagttctcat
gtatcaaccttttcaggagtggatccctcctacaatttacccgataatgttgcactttta
actctccaggagcttgaagatggaaacgttctccttcggttggcacatctatatgagatg
ggagaggataaggaccttgcagtgatggcaagcgtggatctcaaaaagctgttccctgaa
aagaagatcagtaagttagtggagaggaacttgtccgctagtcaagaaagagccgaaatg
gagaagaagagactagtttggaatgttgaaggtacttcagcggatgaacccaaggcaaca
aggggagagtctgtcgatcctgcaaagctagtggtggagctgagtcccatggaaatccgc
accttcatcatcacgtttgattacattttcctccctatggttgatttctga
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integrated database retrieval system
